Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH12P55289 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH12P55289 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CDH12P55289 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH12P55289 AC005261.4-201ENST00000600047 1385 ntBASIC4.69□□□□□ -1.66
CDH12P55289 AP001642.1-201ENST00000624727 2117 ntBASIC4.69□□□□□ -1.66
CDH12P55289 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH12P55289 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH12P55289 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH12P55289 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH12P55289 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH12P55289 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CDH12P55289 RNA5SP242-201ENST00000364171 118 ntBASIC4.69□□□□□ -1.66
CDH12P55289 RN7SKP15-201ENST00000364742 309 ntBASIC4.69□□□□□ -1.66
CDH12P55289 MIR1182-201ENST00000408363 97 ntBASIC4.69□□□□□ -1.66
CDH12P55289 AC002524.1-201ENST00000411687 547 ntBASIC4.69□□□□□ -1.66
CDH12P55289 AL008987.1-201ENST00000415528 237 ntBASIC4.69□□□□□ -1.66
CDH12P55289 ELOCP9-201ENST00000418624 239 ntBASIC4.69□□□□□ -1.66
CDH12P55289 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH12P55289 AC002069.1-201ENST00000429649 1159 ntBASIC4.69□□□□□ -1.66
CDH12P55289 AC022022.1-201ENST00000430304 178 ntBASIC4.69□□□□□ -1.66
CDH12P55289 CDY14P-201ENST00000431260 1014 ntBASIC4.69□□□□□ -1.66
CDH12P55289 RPL7L1P9-201ENST00000431298 745 ntBASIC4.69□□□□□ -1.66
CDH12P55289 AL389925.1-201ENST00000432257 728 ntBASIC4.69□□□□□ -1.66
CDH12P55289 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH12P55289 CDY12P-201ENST00000440679 1015 ntBASIC4.69□□□□□ -1.66
CDH12P55289 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH12P55289 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH12P55289 AC092647.3-201ENST00000443044 633 ntBASIC4.69□□□□□ -1.66
CDH12P55289 CDY13P-201ENST00000445813 1015 ntBASIC4.69□□□□□ -1.66
CDH12P55289 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH12P55289 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH12P55289 CDY23P-201ENST00000451661 1014 ntBASIC4.69□□□□□ -1.66
CDH12P55289 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH12P55289 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH12P55289 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH12P55289 SIAH1P1-201ENST00000479411 923 ntBASIC4.69□□□□□ -1.66
CDH12P55289 AC069528.1-202ENST00000482888 637 ntBASIC4.69□□□□□ -1.66
CDH12P55289 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH12P55289 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH12P55289 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH12P55289 GTF2F2P1-201ENST00000511083 675 ntBASIC4.69□□□□□ -1.66
CDH12P55289 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH12P55289 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH12P55289 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH12P55289 RPL23AP53-201ENST00000521854 457 ntBASIC4.69□□□□□ -1.66
CDH12P55289 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH12P55289 AC091515.1-201ENST00000548110 679 ntBASIC4.69□□□□□ -1.66
CDH12P55289 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH12P55289 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.69□□□□□ -1.66
CDH12P55289 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH12P55289 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH12P55289 AC008088.1-201ENST00000580993 280 ntBASIC4.69□□□□□ -1.66
CDH12P55289 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH12P55289 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH12P55289 AC009948.4-201ENST00000604692 675 ntBASIC4.69□□□□□ -1.66
CDH12P55289 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH12P55289 AC024257.5-201ENST00000612739 531 ntBASIC4.69□□□□□ -1.66
CDH12P55289 VN1R74P-201ENST00000613259 503 ntBASIC4.69□□□□□ -1.66
CDH12P55289 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH12P55289 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.69□□□□□ -1.66
CDH12P55289 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH12P55289 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CDH12P55289 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
CDH12P55289 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH12P55289 AC107068.1-201ENST00000563286 4218 ntBASIC4.69□□□□□ -1.66
CDH12P55289 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH12P55289 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CDH12P55289 AC104446.1-201ENST00000613728 1321 ntBASIC4.69□□□□□ -1.66
CDH12P55289 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH12P55289 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH12P55289 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.68□□□□□ -1.66
CDH12P55289 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH12P55289 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.68□□□□□ -1.66
CDH12P55289 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH12P55289 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH12P55289 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CDH12P55289 RNU6-1214P-201ENST00000363650 109 ntBASIC4.68□□□□□ -1.66
CDH12P55289 SNORA62.2-201ENST00000364672 152 ntBASIC4.68□□□□□ -1.66
CDH12P55289 RNA5SP132-201ENST00000364725 118 ntBASIC4.68□□□□□ -1.66
CDH12P55289 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.68□□□□□ -1.66
CDH12P55289 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH12P55289 MIR600-201ENST00000385007 98 ntBASIC4.68□□□□□ -1.66
CDH12P55289 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH12P55289 OOSP1-201ENST00000398992 1270 ntBASIC4.68□□□□□ -1.66
CDH12P55289 NUDT19P3-201ENST00000404698 555 ntBASIC4.68□□□□□ -1.66
CDH12P55289 AC092745.2-202ENST00000411880 369 ntBASIC4.68□□□□□ -1.66
CDH12P55289 OR4K6P-201ENST00000416478 897 ntBASIC4.68□□□□□ -1.66
CDH12P55289 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.68□□□□□ -1.66
CDH12P55289 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH12P55289 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.68□□□□□ -1.66
CDH12P55289 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH12P55289 AL929288.2-201ENST00000446368 407 ntBASIC4.68□□□□□ -1.66
CDH12P55289 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.68□□□□□ -1.66
CDH12P55289 RPL31P44-201ENST00000447680 377 ntBASIC4.68□□□□□ -1.66
CDH12P55289 AC233982.1-201ENST00000451247 436 ntBASIC4.68□□□□□ -1.66
CDH12P55289 NPM1P13-201ENST00000452663 865 ntBASIC4.68□□□□□ -1.66
CDH12P55289 MRPL35P4-201ENST00000453682 566 ntBASIC4.68□□□□□ -1.66
CDH12P55289 AL122001.1-201ENST00000457027 370 ntBASIC4.68□□□□□ -1.66
CDH12P55289 AL591473.1-201ENST00000464297 313 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms