Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC234064.1-201ENST00000436312 247 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 MTND6P18-201ENST00000439477 513 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 PTGES3P1-201ENST00000439531 483 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.99□□□□□ -1.61
NR1H2P55055 HMGB1P48-201ENST00000446155 598 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.99□□□□□ -1.61
NR1H2P55055 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.99□□□□□ -1.61
NR1H2P55055 AC233982.1-201ENST00000451247 436 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 AC015724.1-201ENST00000478577 156 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
NR1H2P55055 RN7SL184P-201ENST00000488308 297 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.99□□□□□ -1.61
NR1H2P55055 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NR1H2P55055 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.99□□□□□ -1.61
NR1H2P55055 AC118282.2-201ENST00000508739 374 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.99□□□□□ -1.61
NR1H2P55055 AC105031.1-201ENST00000518550 476 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.99□□□□□ -1.61
NR1H2P55055 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.99□□□□□ -1.61
NR1H2P55055 MTND2P32-201ENST00000521584 1038 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.99□□□□□ -1.61
NR1H2P55055 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.99□□□□□ -1.61
NR1H2P55055 OR8I1P-201ENST00000529291 931 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.99□□□□□ -1.61
NR1H2P55055 OR8G3P-201ENST00000533406 921 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.99□□□□□ -1.61
NR1H2P55055 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.99□□□□□ -1.61
NR1H2P55055 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.99□□□□□ -1.61
NR1H2P55055 AC087897.1-201ENST00000550134 156 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
NR1H2P55055 AC096996.1-201ENST00000563813 325 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NR1H2P55055 MTCO2P2-201ENST00000591258 225 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 AL136295.6-201ENST00000610486 658 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.99□□□□□ -1.61
NR1H2P55055 AC068787.1-201ENST00000623908 691 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 AC135068.5-201ENST00000624197 983 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 AL596275.2-204ENST00000641628 552 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 AC073869.8-201ENST00000641806 335 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 AL596275.2-206ENST00000641957 626 ntBASIC4.99□□□□□ -1.61
NR1H2P55055 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
NR1H2P55055 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NR1H2P55055 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.99□□□□□ -1.61
NR1H2P55055 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NR1H2P55055 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
NR1H2P55055 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NR1H2P55055 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NR1H2P55055 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NR1H2P55055 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NR1H2P55055 SCN1A-220ENST00000641603 12506 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 SGO1P1-201ENST00000603525 1447 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
NR1H2P55055 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
NR1H2P55055 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NR1H2P55055 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NR1H2P55055 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.98□□□□□ -1.61
NR1H2P55055 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NR1H2P55055 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NR1H2P55055 OR9G4-201ENST00000302957 984 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.98□□□□□ -1.61
NR1H2P55055 SPTLC1P2-201ENST00000407089 121 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 AL357752.1-201ENST00000412817 349 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 RPSAP35-201ENST00000413753 818 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 MTND4P3-201ENST00000417829 541 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.98□□□□□ -1.61
NR1H2P55055 IPMKP1-201ENST00000425988 855 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 AC092634.2-201ENST00000428146 1010 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.98□□□□□ -1.61
NR1H2P55055 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 CEACAMP1-201ENST00000434624 1035 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 AL627308.1-201ENST00000435693 821 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 AC012075.1-201ENST00000436549 580 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 PTMAP6-201ENST00000439110 327 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.98□□□□□ -1.61
NR1H2P55055 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.98□□□□□ -1.61
NR1H2P55055 TXNP5-201ENST00000441043 315 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.98□□□□□ -1.61
NR1H2P55055 RPS26P30-201ENST00000443431 335 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.98□□□□□ -1.61
NR1H2P55055 RPL7P61-201ENST00000451721 751 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.98□□□□□ -1.61
NR1H2P55055 RPS3AP53-201ENST00000454716 778 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 CYCSP34-201ENST00000458172 304 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 OR2AO1P-201ENST00000476497 403 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NR1H2P55055 AC093270.2-201ENST00000486157 792 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 AC079203.1-201ENST00000487972 404 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 AC009120.1-201ENST00000493458 473 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.98□□□□□ -1.61
NR1H2P55055 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.98□□□□□ -1.61
NR1H2P55055 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.98□□□□□ -1.61
NR1H2P55055 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.98□□□□□ -1.61
NR1H2P55055 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.98□□□□□ -1.61
NR1H2P55055 TCP11X3P-202ENST00000514289 1254 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 AC022360.1-201ENST00000521058 340 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 MRPS16P1-201ENST00000523462 412 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NR1H2P55055 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.98□□□□□ -1.61
NR1H2P55055 AC063949.1-201ENST00000552900 865 ntBASIC4.98□□□□□ -1.61
NR1H2P55055 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms