Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.61□□□□□ -1.35
EPHA4P54764 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
EPHA4P54764 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
EPHA4P54764 OR4G1P-203ENST00000641984 1631 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
EPHA4P54764 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.61□□□□□ -1.35
EPHA4P54764 RIOK3P1-201ENST00000418778 1528 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.61□□□□□ -1.35
EPHA4P54764 AC015871.3-201ENST00000618835 2261 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 SPATA31C2-201ENST00000324915 3777 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.61□□□□□ -1.35
EPHA4P54764 MTND4P35-201ENST00000604257 1375 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
EPHA4P54764 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.61□□□□□ -1.35
EPHA4P54764 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
EPHA4P54764 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.61□□□□□ -1.35
EPHA4P54764 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
EPHA4P54764 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
EPHA4P54764 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
EPHA4P54764 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
EPHA4P54764 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
EPHA4P54764 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
EPHA4P54764 RNA5SP474-201ENST00000391234 90 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 UBBP1-201ENST00000392399 473 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 RNA5SP155-201ENST00000411154 129 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 MTCO2P27-201ENST00000420740 428 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 CYP4F32P-201ENST00000426492 504 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC6.61□□□□□ -1.35
EPHA4P54764 AL356276.2-201ENST00000435919 558 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC6.61□□□□□ -1.35
EPHA4P54764 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC6.61□□□□□ -1.35
EPHA4P54764 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
EPHA4P54764 HMGB1P18-201ENST00000438801 619 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 RPL12P49-201ENST00000441100 121 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 SNRPBP1-201ENST00000443634 282 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.61□□□□□ -1.35
EPHA4P54764 SNORD19B-201ENST00000459623 84 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 RPS10P20-201ENST00000494130 463 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 RN7SL143P-201ENST00000496780 297 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 AC023818.1-201ENST00000498379 384 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
EPHA4P54764 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.61□□□□□ -1.35
EPHA4P54764 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.61□□□□□ -1.35
EPHA4P54764 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.61□□□□□ -1.35
EPHA4P54764 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.61□□□□□ -1.35
EPHA4P54764 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.61□□□□□ -1.35
EPHA4P54764 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.61□□□□□ -1.35
EPHA4P54764 MRPS21P9-201ENST00000571150 257 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.61□□□□□ -1.35
EPHA4P54764 MIR3157-201ENST00000578688 85 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.61□□□□□ -1.35
EPHA4P54764 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.61□□□□□ -1.35
EPHA4P54764 AC008687.2-201ENST00000597865 520 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.61□□□□□ -1.35
EPHA4P54764 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 AL590032.1-201ENST00000604920 252 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 BX323046.1-201ENST00000610145 535 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 AC015819.1-201ENST00000613588 663 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC6.61□□□□□ -1.35
EPHA4P54764 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC6.61□□□□□ -1.35
EPHA4P54764 AL354950.2-201ENST00000617939 290 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 MIR6503-201ENST00000622884 86 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 AC090617.10-201ENST00000624308 134 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.61□□□□□ -1.35
EPHA4P54764 AC007603.3-201ENST00000636915 979 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
EPHA4P54764 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.61□□□□□ -1.35
EPHA4P54764 AC011592.1-201ENST00000624647 3634 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.61□□□□□ -1.35
EPHA4P54764 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
EPHA4P54764 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
EPHA4P54764 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
EPHA4P54764 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.61□□□□□ -1.35
EPHA4P54764 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
EPHA4P54764 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
EPHA4P54764 AC104837.1-201ENST00000444644 1587 ntBASIC6.61□□□□□ -1.35
EPHA4P54764 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
EPHA4P54764 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
EPHA4P54764 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
EPHA4P54764 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
EPHA4P54764 AC217777.1-201ENST00000570034 1471 ntBASIC6.6□□□□□ -1.35
EPHA4P54764 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC6.6□□□□□ -1.35
EPHA4P54764 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
EPHA4P54764 PPBPP2-201ENST00000513150 1362 ntBASIC6.6□□□□□ -1.35
EPHA4P54764 TRIM51GP-201ENST00000534741 1350 ntBASIC6.6□□□□□ -1.35
EPHA4P54764 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
EPHA4P54764 ZNF806-201ENST00000438300 1774 ntBASIC6.6□□□□□ -1.35
EPHA4P54764 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
EPHA4P54764 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
EPHA4P54764 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
EPHA4P54764 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
EPHA4P54764 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
EPHA4P54764 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.6□□□□□ -1.35
EPHA4P54764 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
EPHA4P54764 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.6□□□□□ -1.35
EPHA4P54764 Y_RNA.132-201ENST00000363421 102 ntBASIC6.6□□□□□ -1.35
EPHA4P54764 Y_RNA.145-201ENST00000363527 102 ntBASIC6.6□□□□□ -1.35
EPHA4P54764 RNU6-853P-201ENST00000364306 107 ntBASIC6.6□□□□□ -1.35
EPHA4P54764 RNU6-744P-201ENST00000365557 107 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms