Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.37□□□□□ -1.55
COPB1P53618 AL591926.8-201ENST00000616876 211 ntBASIC5.37□□□□□ -1.55
COPB1P53618 AC105105.5-201ENST00000622635 1294 ntBASIC5.37□□□□□ -1.55
COPB1P53618 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.37□□□□□ -1.55
COPB1P53618 AP003399.1-201ENST00000637534 361 ntBASIC5.37□□□□□ -1.55
COPB1P53618 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
COPB1P53618 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COPB1P53618 AL022322.2-201ENST00000624072 20397 ntBASIC5.37□□□□□ -1.55
COPB1P53618 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COPB1P53618 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COPB1P53618 ZNF849P-201ENST00000594711 1566 ntBASIC5.37□□□□□ -1.55
COPB1P53618 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COPB1P53618 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
COPB1P53618 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
COPB1P53618 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COPB1P53618 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.37□□□□□ -1.55
COPB1P53618 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
COPB1P53618 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
COPB1P53618 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.36□□□□□ -1.55
COPB1P53618 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
COPB1P53618 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.36□□□□□ -1.55
COPB1P53618 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.36□□□□□ -1.55
COPB1P53618 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COPB1P53618 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
COPB1P53618 RNA5SP507-201ENST00000363603 121 ntBASIC5.36□□□□□ -1.55
COPB1P53618 SNORD116-2-201ENST00000384274 95 ntBASIC5.36□□□□□ -1.55
COPB1P53618 SNORD116-6-201ENST00000384711 96 ntBASIC5.36□□□□□ -1.55
COPB1P53618 ATP5F1P2-201ENST00000398143 760 ntBASIC5.36□□□□□ -1.55
COPB1P53618 CHMP1B2P-201ENST00000399581 597 ntBASIC5.36□□□□□ -1.55
COPB1P53618 AC010385.1-201ENST00000412374 256 ntBASIC5.36□□□□□ -1.55
COPB1P53618 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.36□□□□□ -1.55
COPB1P53618 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.36□□□□□ -1.55
COPB1P53618 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.36□□□□□ -1.55
COPB1P53618 AC023128.2-201ENST00000420880 1223 ntBASIC5.36□□□□□ -1.55
COPB1P53618 AL365338.1-201ENST00000422282 858 ntBASIC5.36□□□□□ -1.55
COPB1P53618 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.36□□□□□ -1.55
COPB1P53618 AC010099.3-201ENST00000423896 409 ntBASIC5.36□□□□□ -1.55
COPB1P53618 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.36□□□□□ -1.55
COPB1P53618 RHOT1P3-201ENST00000436571 331 ntBASIC5.36□□□□□ -1.55
COPB1P53618 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.36□□□□□ -1.55
COPB1P53618 PTMAP6-201ENST00000439110 327 ntBASIC5.36□□□□□ -1.55
COPB1P53618 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.36□□□□□ -1.55
COPB1P53618 RN7SL172P-201ENST00000460535 303 ntBASIC5.36□□□□□ -1.55
COPB1P53618 RPS4XP12-201ENST00000461747 709 ntBASIC5.36□□□□□ -1.55
COPB1P53618 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.36□□□□□ -1.55
COPB1P53618 OR11I1P-201ENST00000486033 954 ntBASIC5.36□□□□□ -1.55
COPB1P53618 HMGN2P25-201ENST00000486956 268 ntBASIC5.36□□□□□ -1.55
COPB1P53618 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.36□□□□□ -1.55
COPB1P53618 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.36□□□□□ -1.55
COPB1P53618 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.36□□□□□ -1.55
COPB1P53618 Y_RNA.719-201ENST00000517156 106 ntBASIC5.36□□□□□ -1.55
COPB1P53618 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.36□□□□□ -1.55
COPB1P53618 AC013701.1-201ENST00000522657 465 ntBASIC5.36□□□□□ -1.55
COPB1P53618 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.36□□□□□ -1.55
COPB1P53618 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.36□□□□□ -1.55
COPB1P53618 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.36□□□□□ -1.55
COPB1P53618 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
COPB1P53618 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.36□□□□□ -1.55
COPB1P53618 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.36□□□□□ -1.55
COPB1P53618 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.36□□□□□ -1.55
COPB1P53618 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
COPB1P53618 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.36□□□□□ -1.55
COPB1P53618 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.36□□□□□ -1.55
COPB1P53618 AC079610.2-201ENST00000604818 690 ntBASIC5.36□□□□□ -1.55
COPB1P53618 MIR7155-201ENST00000615925 56 ntBASIC5.36□□□□□ -1.55
COPB1P53618 AC019206.1-201ENST00000621938 425 ntBASIC5.36□□□□□ -1.55
COPB1P53618 AC015804.1-201ENST00000622935 435 ntBASIC5.36□□□□□ -1.55
COPB1P53618 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.36□□□□□ -1.55
COPB1P53618 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COPB1P53618 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
COPB1P53618 NXF4-202ENST00000416098 1465 ntBASIC5.36□□□□□ -1.55
COPB1P53618 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.36□□□□□ -1.55
COPB1P53618 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
COPB1P53618 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COPB1P53618 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COPB1P53618 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COPB1P53618 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.35□□□□□ -1.55
COPB1P53618 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.35□□□□□ -1.55
COPB1P53618 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COPB1P53618 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
COPB1P53618 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COPB1P53618 PABPC1P6-201ENST00000445594 1829 ntBASIC5.35□□□□□ -1.55
COPB1P53618 AC008758.3-201ENST00000507003 1829 ntBASIC5.35□□□□□ -1.55
COPB1P53618 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COPB1P53618 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
COPB1P53618 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COPB1P53618 AC092111.2-201ENST00000611627 1414 ntBASIC5.35□□□□□ -1.55
COPB1P53618 AC017007.4-201ENST00000503353 1352 ntBASIC5.35□□□□□ -1.55
COPB1P53618 AC109780.1-201ENST00000451768 1344 ntBASIC5.35□□□□□ -1.55
COPB1P53618 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
COPB1P53618 RNU1-83P-201ENST00000363426 164 ntBASIC5.35□□□□□ -1.55
COPB1P53618 RNU6-236P-201ENST00000363886 106 ntBASIC5.35□□□□□ -1.55
COPB1P53618 U6.112-201ENST00000384129 70 ntBASIC5.35□□□□□ -1.55
COPB1P53618 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.35□□□□□ -1.55
COPB1P53618 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COPB1P53618 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.35□□□□□ -1.55
COPB1P53618 AL034379.1-201ENST00000423216 253 ntBASIC5.35□□□□□ -1.55
COPB1P53618 TXNL1P1-201ENST00000429528 554 ntBASIC5.35□□□□□ -1.55
COPB1P53618 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.35□□□□□ -1.55
COPB1P53618 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms