Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RNA5SP46-201ENST00000362370 120 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.14□□□□□ -1.75
NKX2-1P43699 LYPLA1P3-201ENST00000402650 695 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 AP000580.1-201ENST00000404439 358 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 SDHDP6-201ENST00000414693 480 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 AC114814.2-201ENST00000419195 485 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NKX2-1P43699 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NKX2-1P43699 AC092634.2-201ENST00000428146 1010 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 FABP7P2-201ENST00000429946 379 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-1P43699 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.14□□□□□ -1.75
NKX2-1P43699 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-1P43699 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.14□□□□□ -1.75
NKX2-1P43699 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.14□□□□□ -1.75
NKX2-1P43699 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-1P43699 AC245047.2-201ENST00000441060 530 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 MTND1P33-201ENST00000446251 917 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 PTMAP3-201ENST00000447474 330 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-1P43699 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.14□□□□□ -1.75
NKX2-1P43699 OR2AF1P-201ENST00000454899 889 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-1P43699 AC084754.1-201ENST00000463466 464 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 AC073522.1-201ENST00000483312 377 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 RN7SL591P-201ENST00000496150 292 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 RPL21P131-201ENST00000497298 483 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 AC023050.1-201ENST00000498198 304 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-1P43699 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.14□□□□□ -1.75
NKX2-1P43699 AC012400.1-201ENST00000518452 381 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 HMGB1P23-201ENST00000518743 568 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-1P43699 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-1P43699 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.14□□□□□ -1.75
NKX2-1P43699 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-1P43699 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.14□□□□□ -1.75
NKX2-1P43699 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.14□□□□□ -1.75
NKX2-1P43699 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-1P43699 AC087897.1-201ENST00000550134 156 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.14□□□□□ -1.75
NKX2-1P43699 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.14□□□□□ -1.75
NKX2-1P43699 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.14□□□□□ -1.75
NKX2-1P43699 CYP2C60P-201ENST00000566088 139 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.14□□□□□ -1.75
NKX2-1P43699 MIR4716-201ENST00000579628 84 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-1P43699 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-1P43699 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-1P43699 PCNAP1-202ENST00000595299 752 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
NKX2-1P43699 CLIC4P2-201ENST00000601934 717 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 AC009948.4-201ENST00000604692 675 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 AL365400.2-201ENST00000605604 902 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.14□□□□□ -1.75
NKX2-1P43699 AC106052.1-201ENST00000608029 497 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 AP003072.4-201ENST00000624580 310 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.14□□□□□ -1.75
NKX2-1P43699 BX649567.1-201ENST00000642071 1134 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NKX2-1P43699 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.14□□□□□ -1.75
NKX2-1P43699 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NKX2-1P43699 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.14□□□□□ -1.75
NKX2-1P43699 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.14□□□□□ -1.75
NKX2-1P43699 SEPT7P7-201ENST00000420492 1301 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.14□□□□□ -1.75
NKX2-1P43699 AL034370.1-201ENST00000397254 1590 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NKX2-1P43699 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NKX2-1P43699 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.14□□□□□ -1.75
NKX2-1P43699 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
NKX2-1P43699 AC025263.3-201ENST00000622965 1396 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NKX2-1P43699 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX2-1P43699 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NKX2-1P43699 RNU4-51P-201ENST00000364206 140 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 RNU6-353P-201ENST00000364266 108 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX2-1P43699 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NKX2-1P43699 SNORA2.3-201ENST00000383920 135 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 RNA5SP284-201ENST00000384547 118 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX2-1P43699 RN7SKP199-201ENST00000410325 305 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 RPS7P9-201ENST00000414704 586 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 BMS1P17-202ENST00000416720 316 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.13□□□□□ -1.75
NKX2-1P43699 SLC35E1P1-201ENST00000419313 864 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.13□□□□□ -1.75
NKX2-1P43699 AL590609.2-201ENST00000421430 368 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.13□□□□□ -1.75
NKX2-1P43699 OSTCP5-201ENST00000425293 453 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 AL662874.1-201ENST00000426065 230 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 MTCYBP15-201ENST00000433123 1127 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 USP9YP24-201ENST00000434374 697 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 NMNAT1P2-201ENST00000435192 860 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.13□□□□□ -1.75
NKX2-1P43699 FMO7P-201ENST00000436045 768 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX2-1P43699 NPM1P33-201ENST00000438918 872 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms