Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 BNIP3P1-201ENST00000547295 580 ntBASIC5.07□□□□□ -1.6
PTPN9P43378 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.07□□□□□ -1.6
PTPN9P43378 ZNF971P-201ENST00000562068 1249 ntBASIC5.07□□□□□ -1.6
PTPN9P43378 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.07□□□□□ -1.6
PTPN9P43378 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.07□□□□□ -1.6
PTPN9P43378 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.07□□□□□ -1.6
PTPN9P43378 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.07□□□□□ -1.6
PTPN9P43378 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.07□□□□□ -1.6
PTPN9P43378 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.07□□□□□ -1.6
PTPN9P43378 AC011487.3-201ENST00000593607 453 ntBASIC5.07□□□□□ -1.6
PTPN9P43378 AP001160.4-201ENST00000596971 382 ntBASIC5.07□□□□□ -1.6
PTPN9P43378 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PTPN9P43378 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.07□□□□□ -1.6
PTPN9P43378 AC112220.2-201ENST00000605513 533 ntBASIC5.07□□□□□ -1.6
PTPN9P43378 AL121932.1-201ENST00000605542 214 ntBASIC5.07□□□□□ -1.6
PTPN9P43378 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.07□□□□□ -1.6
PTPN9P43378 AL078595.3-201ENST00000623815 1166 ntBASIC5.07□□□□□ -1.6
PTPN9P43378 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PTPN9P43378 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTPN9P43378 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PTPN9P43378 AL022393.1-201ENST00000625142 1677 ntBASIC5.07□□□□□ -1.6
PTPN9P43378 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PTPN9P43378 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PTPN9P43378 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
PTPN9P43378 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
PTPN9P43378 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTPN9P43378 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.07□□□□□ -1.6
PTPN9P43378 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTPN9P43378 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PTPN9P43378 AC015813.6-201ENST00000624409 5808 ntBASIC5.07□□□□□ -1.6
PTPN9P43378 AL672167.1-204ENST00000641875 3017 ntBASIC5.07□□□□□ -1.6
PTPN9P43378 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PTPN9P43378 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PTPN9P43378 GTF2H2B-203ENST00000508065 1432 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 AC000374.1-201ENST00000434698 1745 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTPN9P43378 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPN9P43378 AC093311.1-201ENST00000506586 2021 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPN9P43378 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPN9P43378 STX3-208ENST00000641815 3236 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 SEC63P2-201ENST00000503863 1939 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 AC008549.2-201ENST00000333482 706 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PTPN9P43378 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTPN9P43378 AL109941.1-201ENST00000401925 229 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 RPL7P27-201ENST00000403775 720 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 U3.35-201ENST00000408405 208 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 RN7SKP222-201ENST00000410651 315 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 RN7SKP247-201ENST00000411094 308 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 AC013404.1-201ENST00000413068 249 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 AC114755.2-201ENST00000413520 361 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 OR2AM1P-201ENST00000422137 422 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 RGS17P1-201ENST00000423358 553 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 EIF4HP2-201ENST00000424380 563 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.06□□□□□ -1.6
PTPN9P43378 MTND2P5-201ENST00000432656 1006 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 AL451139.1-201ENST00000434718 346 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 PTMAP6-201ENST00000439110 327 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 OR51B8P-201ENST00000449892 769 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 RHEBP2-201ENST00000450289 600 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 AL009048.1-201ENST00000450437 298 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTPN9P43378 SNORD11.1-201ENST00000459482 85 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPN9P43378 AC096741.1-201ENST00000472250 846 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 RPS27AP16-201ENST00000492222 470 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.06□□□□□ -1.6
PTPN9P43378 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTPN9P43378 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.06□□□□□ -1.6
PTPN9P43378 SNORA19.3-201ENST00000516165 130 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.06□□□□□ -1.6
PTPN9P43378 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.06□□□□□ -1.6
PTPN9P43378 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.06□□□□□ -1.6
PTPN9P43378 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.06□□□□□ -1.6
PTPN9P43378 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPN9P43378 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPN9P43378 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PTPN9P43378 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.06□□□□□ -1.6
PTPN9P43378 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.06□□□□□ -1.6
PTPN9P43378 AL132857.1-201ENST00000555180 708 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.06□□□□□ -1.6
PTPN9P43378 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.06□□□□□ -1.6
PTPN9P43378 AC016180.1-201ENST00000567945 403 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 AC027455.1-201ENST00000574104 594 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 MIR4675-201ENST00000577898 77 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPN9P43378 AL160237.3-201ENST00000604114 1013 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.06□□□□□ -1.6
PTPN9P43378 AC211433.2-201ENST00000608433 387 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 AC007497.1-201ENST00000610421 561 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPN9P43378 AC012414.7-202ENST00000622705 1090 ntBASIC5.06□□□□□ -1.6
PTPN9P43378 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPN9P43378 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTPN9P43378 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTPN9P43378 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTPN9P43378 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.06□□□□□ -1.6
PTPN9P43378 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms