Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL15A1P39059 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL15A1P39059 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
COL15A1P39059 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL15A1P39059 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL15A1P39059 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL15A1P39059 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL15A1P39059 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL15A1P39059 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL15A1P39059 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL15A1P39059 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.88□□□□□ -1.47
COL15A1P39059 AL627171.1-201ENST00000618845 1308 ntBASIC5.88□□□□□ -1.47
COL15A1P39059 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL15A1P39059 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.88□□□□□ -1.47
COL15A1P39059 NOL8P1-201ENST00000508336 3529 ntBASIC5.88□□□□□ -1.47
COL15A1P39059 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL15A1P39059 TAF9BP2-201ENST00000400856 499 ntBASIC5.88□□□□□ -1.47
COL15A1P39059 NPM1P37-201ENST00000403105 874 ntBASIC5.88□□□□□ -1.47
COL15A1P39059 OR13Z1P-201ENST00000416141 834 ntBASIC5.88□□□□□ -1.47
COL15A1P39059 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.88□□□□□ -1.47
COL15A1P39059 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.88□□□□□ -1.47
COL15A1P39059 MTATP6P17-201ENST00000431030 672 ntBASIC5.88□□□□□ -1.47
COL15A1P39059 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL15A1P39059 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.88□□□□□ -1.47
COL15A1P39059 AC104651.2-201ENST00000447549 528 ntBASIC5.88□□□□□ -1.47
COL15A1P39059 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.88□□□□□ -1.47
COL15A1P39059 SCARNA10-201ENST00000459255 330 ntBASIC5.88□□□□□ -1.47
COL15A1P39059 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.88□□□□□ -1.47
COL15A1P39059 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.88□□□□□ -1.47
COL15A1P39059 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.88□□□□□ -1.47
COL15A1P39059 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.88□□□□□ -1.47
COL15A1P39059 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL15A1P39059 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.88□□□□□ -1.47
COL15A1P39059 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.88□□□□□ -1.47
COL15A1P39059 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
COL15A1P39059 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.88□□□□□ -1.47
COL15A1P39059 AL445567.2-201ENST00000618935 498 ntBASIC5.88□□□□□ -1.47
COL15A1P39059 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
COL15A1P39059 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL15A1P39059 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL15A1P39059 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
COL15A1P39059 AC135352.1-201ENST00000506173 1418 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.87□□□□□ -1.47
COL15A1P39059 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.87□□□□□ -1.47
COL15A1P39059 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL15A1P39059 AC108467.2-201ENST00000617640 1597 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL15A1P39059 SNORA70C-201ENST00000384538 135 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 Z98745.1-201ENST00000402553 494 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 RPS3AP25-201ENST00000411660 793 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.87□□□□□ -1.47
COL15A1P39059 TMSB10P2-201ENST00000416049 131 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL15A1P39059 BTF3P9-201ENST00000418784 283 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 AC106883.1-201ENST00000418805 562 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.87□□□□□ -1.47
COL15A1P39059 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.87□□□□□ -1.47
COL15A1P39059 RPS29P17-201ENST00000430795 166 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.87□□□□□ -1.47
COL15A1P39059 RPS3AP54-201ENST00000435535 734 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL15A1P39059 MRPL48P1-201ENST00000445390 636 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.87□□□□□ -1.47
COL15A1P39059 AC239798.3-201ENST00000454459 408 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.87□□□□□ -1.47
COL15A1P39059 CR383656.1-201ENST00000484916 377 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.87□□□□□ -1.47
COL15A1P39059 PRELID3BP6-201ENST00000503839 571 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.87□□□□□ -1.47
COL15A1P39059 SLC25A15P5-201ENST00000508033 253 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.87□□□□□ -1.47
COL15A1P39059 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.87□□□□□ -1.47
COL15A1P39059 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL15A1P39059 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.87□□□□□ -1.47
COL15A1P39059 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.87□□□□□ -1.47
COL15A1P39059 AP001804.2-201ENST00000533932 910 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 AC087894.1-201ENST00000538359 518 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 MTND1P24-201ENST00000552175 861 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.87□□□□□ -1.47
COL15A1P39059 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.87□□□□□ -1.47
COL15A1P39059 BNIP3P22-201ENST00000593399 556 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.87□□□□□ -1.47
COL15A1P39059 AC067838.1-201ENST00000606064 577 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 AC024941.1-201ENST00000612250 334 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 ZYXP1-201ENST00000617638 118 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 AC011815.3-201ENST00000624194 473 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 STX3-208ENST00000641815 3236 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.87□□□□□ -1.47
COL15A1P39059 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.87□□□□□ -1.47
COL15A1P39059 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
COL15A1P39059 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL15A1P39059 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
COL15A1P39059 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
COL15A1P39059 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL15A1P39059 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
COL15A1P39059 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL15A1P39059 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL15A1P39059 MTND5P23-201ENST00000430812 1655 ntBASIC5.87□□□□□ -1.47
COL15A1P39059 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
COL15A1P39059 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms