Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.37□□□□□ -1.55
CIITAP33076 AC079168.2-201ENST00000453977 416 ntBASIC5.37□□□□□ -1.55
CIITAP33076 AC092691.2-201ENST00000461787 803 ntBASIC5.37□□□□□ -1.55
CIITAP33076 AC010326.1-201ENST00000462726 602 ntBASIC5.37□□□□□ -1.55
CIITAP33076 RPS29P22-201ENST00000472363 168 ntBASIC5.37□□□□□ -1.55
CIITAP33076 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CIITAP33076 SUMO1P1-201ENST00000497904 306 ntBASIC5.37□□□□□ -1.55
CIITAP33076 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.37□□□□□ -1.55
CIITAP33076 SUMO2P5-201ENST00000506790 245 ntBASIC5.37□□□□□ -1.55
CIITAP33076 CDH12P4-201ENST00000517835 295 ntBASIC5.37□□□□□ -1.55
CIITAP33076 CDH12P3-201ENST00000517935 295 ntBASIC5.37□□□□□ -1.55
CIITAP33076 CDH12P1-201ENST00000518435 295 ntBASIC5.37□□□□□ -1.55
CIITAP33076 HAUS1P3-201ENST00000523909 662 ntBASIC5.37□□□□□ -1.55
CIITAP33076 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CIITAP33076 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CIITAP33076 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.37□□□□□ -1.55
CIITAP33076 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CIITAP33076 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.37□□□□□ -1.55
CIITAP33076 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.37□□□□□ -1.55
CIITAP33076 AL161616.1-201ENST00000611867 286 ntBASIC5.37□□□□□ -1.55
CIITAP33076 AC078880.5-201ENST00000617845 421 ntBASIC5.37□□□□□ -1.55
CIITAP33076 MIR7703-201ENST00000620784 77 ntBASIC5.37□□□□□ -1.55
CIITAP33076 AC145207.9-201ENST00000623802 325 ntBASIC5.37□□□□□ -1.55
CIITAP33076 AC068787.1-201ENST00000623908 691 ntBASIC5.37□□□□□ -1.55
CIITAP33076 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CIITAP33076 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CIITAP33076 AC010928.1-201ENST00000592477 1447 ntBASIC5.37□□□□□ -1.55
CIITAP33076 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.37□□□□□ -1.55
CIITAP33076 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CIITAP33076 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CIITAP33076 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CIITAP33076 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CIITAP33076 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
CIITAP33076 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CIITAP33076 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.36□□□□□ -1.55
CIITAP33076 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CIITAP33076 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CIITAP33076 RNU1-82P-201ENST00000390851 165 ntBASIC5.36□□□□□ -1.55
CIITAP33076 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CIITAP33076 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CIITAP33076 AL591848.1-201ENST00000413092 322 ntBASIC5.36□□□□□ -1.55
CIITAP33076 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.36□□□□□ -1.55
CIITAP33076 E2F6P2-201ENST00000420708 748 ntBASIC5.36□□□□□ -1.55
CIITAP33076 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.36□□□□□ -1.55
CIITAP33076 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.36□□□□□ -1.55
CIITAP33076 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.36□□□□□ -1.55
CIITAP33076 ELOCP13-201ENST00000443934 329 ntBASIC5.36□□□□□ -1.55
CIITAP33076 AL035551.1-201ENST00000446931 348 ntBASIC5.36□□□□□ -1.55
CIITAP33076 AC108463.1-201ENST00000450258 347 ntBASIC5.36□□□□□ -1.55
CIITAP33076 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.36□□□□□ -1.55
CIITAP33076 AC096741.1-201ENST00000472250 846 ntBASIC5.36□□□□□ -1.55
CIITAP33076 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.36□□□□□ -1.55
CIITAP33076 RPL7AP10-201ENST00000481016 791 ntBASIC5.36□□□□□ -1.55
CIITAP33076 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.36□□□□□ -1.55
CIITAP33076 RPS23P1-201ENST00000491662 432 ntBASIC5.36□□□□□ -1.55
CIITAP33076 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
CIITAP33076 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.36□□□□□ -1.55
CIITAP33076 RNU2-30P-201ENST00000516209 141 ntBASIC5.36□□□□□ -1.55
CIITAP33076 RN7SKP265-201ENST00000516448 223 ntBASIC5.36□□□□□ -1.55
CIITAP33076 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.36□□□□□ -1.55
CIITAP33076 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.36□□□□□ -1.55
CIITAP33076 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.36□□□□□ -1.55
CIITAP33076 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.36□□□□□ -1.55
CIITAP33076 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.36□□□□□ -1.55
CIITAP33076 OR5M2P-201ENST00000529003 936 ntBASIC5.36□□□□□ -1.55
CIITAP33076 AC104229.1-201ENST00000561364 255 ntBASIC5.36□□□□□ -1.55
CIITAP33076 RN7SL652P-201ENST00000577769 300 ntBASIC5.36□□□□□ -1.55
CIITAP33076 MIR4700-201ENST00000578311 74 ntBASIC5.36□□□□□ -1.55
CIITAP33076 AC073091.2-201ENST00000603205 907 ntBASIC5.36□□□□□ -1.55
CIITAP33076 CASC19-206ENST00000641028 1430 ntBASIC5.36□□□□□ -1.55
CIITAP33076 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CIITAP33076 AC025574.1-201ENST00000554784 1653 ntBASIC5.36□□□□□ -1.55
CIITAP33076 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CIITAP33076 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.36□□□□□ -1.55
CIITAP33076 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CIITAP33076 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.36□□□□□ -1.55
CIITAP33076 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CIITAP33076 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CIITAP33076 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CIITAP33076 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CIITAP33076 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CIITAP33076 AC125257.1-201ENST00000560400 2930 ntBASIC5.35□□□□□ -1.55
CIITAP33076 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CIITAP33076 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.35□□□□□ -1.55
CIITAP33076 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CIITAP33076 AL590240.1-201ENST00000334118 313 ntBASIC5.35□□□□□ -1.55
CIITAP33076 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CIITAP33076 RNU6-481P-201ENST00000384194 107 ntBASIC5.35□□□□□ -1.55
CIITAP33076 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CIITAP33076 CYB5AP4-201ENST00000396692 399 ntBASIC5.35□□□□□ -1.55
CIITAP33076 MIR298-201ENST00000401212 88 ntBASIC5.35□□□□□ -1.55
CIITAP33076 HMGB3P19-201ENST00000403971 560 ntBASIC5.35□□□□□ -1.55
CIITAP33076 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CIITAP33076 NPM1P40-201ENST00000412758 733 ntBASIC5.35□□□□□ -1.55
CIITAP33076 AL445183.3-201ENST00000414168 502 ntBASIC5.35□□□□□ -1.55
CIITAP33076 AL590806.1-201ENST00000415818 853 ntBASIC5.35□□□□□ -1.55
CIITAP33076 ATG4AP1-201ENST00000416893 538 ntBASIC5.35□□□□□ -1.55
CIITAP33076 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.35□□□□□ -1.55
CIITAP33076 AC140479.3-201ENST00000418944 1126 ntBASIC5.35□□□□□ -1.55
CIITAP33076 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms