Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RNU6-304P-201ENST00000364855 107 ntBASIC5.07□□□□□ -1.6
HOXC8P31273 RNA5SP479-201ENST00000364858 117 ntBASIC5.07□□□□□ -1.6
HOXC8P31273 VDAC2P1-201ENST00000399358 958 ntBASIC5.07□□□□□ -1.6
HOXC8P31273 AC104333.2-201ENST00000422630 192 ntBASIC5.07□□□□□ -1.6
HOXC8P31273 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXC8P31273 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXC8P31273 AL450263.2-201ENST00000439400 589 ntBASIC5.07□□□□□ -1.6
HOXC8P31273 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.07□□□□□ -1.6
HOXC8P31273 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXC8P31273 AL591623.2-201ENST00000449978 222 ntBASIC5.07□□□□□ -1.6
HOXC8P31273 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXC8P31273 AC020898.1-201ENST00000474167 787 ntBASIC5.07□□□□□ -1.6
HOXC8P31273 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXC8P31273 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.07□□□□□ -1.6
HOXC8P31273 RN7SL810P-201ENST00000493031 276 ntBASIC5.07□□□□□ -1.6
HOXC8P31273 CAB39P1-201ENST00000502277 460 ntBASIC5.07□□□□□ -1.6
HOXC8P31273 AC010476.1-201ENST00000519111 851 ntBASIC5.07□□□□□ -1.6
HOXC8P31273 AC138701.1-201ENST00000524329 714 ntBASIC5.07□□□□□ -1.6
HOXC8P31273 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXC8P31273 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.07□□□□□ -1.6
HOXC8P31273 AC098483.2-201ENST00000603158 454 ntBASIC5.07□□□□□ -1.6
HOXC8P31273 AC096553.1-201ENST00000605169 829 ntBASIC5.07□□□□□ -1.6
HOXC8P31273 AC025175.1-201ENST00000606482 759 ntBASIC5.07□□□□□ -1.6
HOXC8P31273 FRG1EP-201ENST00000634469 770 ntBASIC5.07□□□□□ -1.6
HOXC8P31273 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXC8P31273 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.07□□□□□ -1.6
HOXC8P31273 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HOXC8P31273 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HOXC8P31273 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HOXC8P31273 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HOXC8P31273 STX3-208ENST00000641815 3236 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HOXC8P31273 VN2R3P-201ENST00000422626 1412 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC8P31273 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC8P31273 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC8P31273 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC8P31273 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
HOXC8P31273 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.06□□□□□ -1.6
HOXC8P31273 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HOXC8P31273 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC8P31273 RNU6-178P-201ENST00000384631 104 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 RNU6-1176P-201ENST00000390955 107 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 UBE2V1P15-201ENST00000407776 448 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXC8P31273 TMSB10P2-201ENST00000416049 131 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 AL357078.2-201ENST00000416486 427 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 E2F6P2-201ENST00000420708 748 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 EIF4HP2-201ENST00000424380 563 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXC8P31273 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 AP001324.1-201ENST00000428553 399 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXC8P31273 RPS29P17-201ENST00000430795 166 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXC8P31273 NPM1P33-201ENST00000438918 872 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC8P31273 AL513321.1-201ENST00000441175 761 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 RPL34P26-201ENST00000445636 354 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXC8P31273 ISCUP1-201ENST00000454451 448 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.06□□□□□ -1.6
HOXC8P31273 AC245028.2-201ENST00000458673 253 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 RN7SL303P-201ENST00000469773 251 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 RPL21P126-201ENST00000470049 478 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 RPL21P6-201ENST00000479171 504 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 SYT14P1-201ENST00000481459 721 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.06□□□□□ -1.6
HOXC8P31273 RN7SKP141-201ENST00000516167 338 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC8P31273 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXC8P31273 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.06□□□□□ -1.6
HOXC8P31273 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXC8P31273 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.06□□□□□ -1.6
HOXC8P31273 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXC8P31273 AC068714.1-201ENST00000559623 800 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 MIR3939-201ENST00000582614 106 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 AP001160.4-201ENST00000596971 382 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXC8P31273 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXC8P31273 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXC8P31273 AC007342.8-201ENST00000623278 678 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 TMEM30CP-203ENST00000637814 1035 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXC8P31273 AC108467.2-201ENST00000617640 1597 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXC8P31273 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.06□□□□□ -1.6
HOXC8P31273 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.06□□□□□ -1.6
HOXC8P31273 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC8P31273 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXC8P31273 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
HOXC8P31273 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC8P31273 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
HOXC8P31273 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HOXC8P31273 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC8P31273 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.06□□□□□ -1.6
HOXC8P31273 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC8P31273 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC8P31273 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC8P31273 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms