Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4□□□□□ -1.77
CD40LGP29965 HMGN2P6-201ENST00000551091 273 ntBASIC4□□□□□ -1.77
CD40LGP29965 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4□□□□□ -1.77
CD40LGP29965 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4□□□□□ -1.77
CD40LGP29965 AC007424.1-203ENST00000554613 687 ntBASIC4□□□□□ -1.77
CD40LGP29965 EDDM3DP-201ENST00000554692 434 ntBASIC4□□□□□ -1.77
CD40LGP29965 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4□□□□□ -1.77
CD40LGP29965 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4□□□□□ -1.77
CD40LGP29965 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4□□□□□ -1.77
CD40LGP29965 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4□□□□□ -1.77
CD40LGP29965 AC010857.1-201ENST00000606398 594 ntBASIC4□□□□□ -1.77
CD40LGP29965 AC012213.4-201ENST00000606457 354 ntBASIC4□□□□□ -1.77
CD40LGP29965 AC100847.1-201ENST00000611316 481 ntBASIC4□□□□□ -1.77
CD40LGP29965 SDR42E1P1-201ENST00000611327 477 ntBASIC4□□□□□ -1.77
CD40LGP29965 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CD40LGP29965 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CD40LGP29965 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
CD40LGP29965 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4□□□□□ -1.77
CD40LGP29965 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CD40LGP29965 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4□□□□□ -1.77
CD40LGP29965 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
CD40LGP29965 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CD40LGP29965 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CD40LGP29965 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.99□□□□□ -1.77
CD40LGP29965 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CD40LGP29965 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.99□□□□□ -1.77
CD40LGP29965 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CD40LGP29965 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CD40LGP29965 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CD40LGP29965 FAM3C2-201ENST00000312214 681 ntBASIC3.99□□□□□ -1.77
CD40LGP29965 RPL23P2-201ENST00000320371 421 ntBASIC3.99□□□□□ -1.77
CD40LGP29965 RNA5SP307-201ENST00000362863 116 ntBASIC3.99□□□□□ -1.77
CD40LGP29965 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
CD40LGP29965 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC3.99□□□□□ -1.77
CD40LGP29965 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.99□□□□□ -1.77
CD40LGP29965 NPM1P24-201ENST00000428039 894 ntBASIC3.99□□□□□ -1.77
CD40LGP29965 FTH1P6-201ENST00000430768 320 ntBASIC3.99□□□□□ -1.77
CD40LGP29965 PSMD10P3-201ENST00000437000 448 ntBASIC3.99□□□□□ -1.77
CD40LGP29965 AF228730.2-201ENST00000438784 848 ntBASIC3.99□□□□□ -1.77
CD40LGP29965 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.99□□□□□ -1.77
CD40LGP29965 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.99□□□□□ -1.77
CD40LGP29965 HMGN2P25-201ENST00000486956 268 ntBASIC3.99□□□□□ -1.77
CD40LGP29965 AC109458.1-201ENST00000508858 316 ntBASIC3.99□□□□□ -1.77
CD40LGP29965 COX6B1P5-201ENST00000509843 249 ntBASIC3.99□□□□□ -1.77
CD40LGP29965 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.99□□□□□ -1.77
CD40LGP29965 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.99□□□□□ -1.77
CD40LGP29965 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.99□□□□□ -1.77
CD40LGP29965 RPL23AP97-201ENST00000568955 471 ntBASIC3.99□□□□□ -1.77
CD40LGP29965 MIR4458-201ENST00000578872 75 ntBASIC3.99□□□□□ -1.77
CD40LGP29965 AC090181.2-201ENST00000602975 672 ntBASIC3.99□□□□□ -1.77
CD40LGP29965 AC083899.3-201ENST00000603413 594 ntBASIC3.99□□□□□ -1.77
CD40LGP29965 AC016957.2-201ENST00000616998 848 ntBASIC3.99□□□□□ -1.77
CD40LGP29965 AP002799.1-201ENST00000623552 423 ntBASIC3.99□□□□□ -1.77
CD40LGP29965 AC008785.1-201ENST00000624475 456 ntBASIC3.99□□□□□ -1.77
CD40LGP29965 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC3.99□□□□□ -1.77
CD40LGP29965 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.99□□□□□ -1.77
CD40LGP29965 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CD40LGP29965 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CD40LGP29965 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CD40LGP29965 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CD40LGP29965 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.98□□□□□ -1.77
CD40LGP29965 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.98□□□□□ -1.77
CD40LGP29965 MTCO1P14-201ENST00000441695 1559 ntBASIC3.98□□□□□ -1.77
CD40LGP29965 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CD40LGP29965 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CD40LGP29965 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.98□□□□□ -1.77
CD40LGP29965 RNA5SP305-201ENST00000362665 119 ntBASIC3.98□□□□□ -1.77
CD40LGP29965 SNORA74A-201ENST00000364089 198 ntBASIC3.98□□□□□ -1.77
CD40LGP29965 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.98□□□□□ -1.77
CD40LGP29965 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.98□□□□□ -1.77
CD40LGP29965 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CD40LGP29965 MIR3074-201ENST00000384885 81 ntBASIC3.98□□□□□ -1.77
CD40LGP29965 MIR105-2-201ENST00000385083 81 ntBASIC3.98□□□□□ -1.77
CD40LGP29965 SNORA74C-2-201ENST00000411179 201 ntBASIC3.98□□□□□ -1.77
CD40LGP29965 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC3.98□□□□□ -1.77
CD40LGP29965 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.98□□□□□ -1.77
CD40LGP29965 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.98□□□□□ -1.77
CD40LGP29965 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.98□□□□□ -1.77
CD40LGP29965 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.98□□□□□ -1.77
CD40LGP29965 AC009965.2-201ENST00000425328 970 ntBASIC3.98□□□□□ -1.77
CD40LGP29965 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.98□□□□□ -1.77
CD40LGP29965 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.98□□□□□ -1.77
CD40LGP29965 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.98□□□□□ -1.77
CD40LGP29965 AC090142.1-201ENST00000465776 462 ntBASIC3.98□□□□□ -1.77
CD40LGP29965 OR52A4P-201ENST00000472867 958 ntBASIC3.98□□□□□ -1.77
CD40LGP29965 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.98□□□□□ -1.77
CD40LGP29965 RPSAP50-201ENST00000481955 852 ntBASIC3.98□□□□□ -1.77
CD40LGP29965 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.98□□□□□ -1.77
CD40LGP29965 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.98□□□□□ -1.77
CD40LGP29965 RNU6-319P-201ENST00000516025 108 ntBASIC3.98□□□□□ -1.77
CD40LGP29965 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CD40LGP29965 OR7E128P-201ENST00000532736 1024 ntBASIC3.98□□□□□ -1.77
CD40LGP29965 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC3.98□□□□□ -1.77
CD40LGP29965 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC3.98□□□□□ -1.77
CD40LGP29965 RN7SL722P-201ENST00000617780 284 ntBASIC3.98□□□□□ -1.77
CD40LGP29965 RN7SL565P-201ENST00000618246 284 ntBASIC3.98□□□□□ -1.77
CD40LGP29965 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.98□□□□□ -1.77
CD40LGP29965 AC008725.1-201ENST00000605123 2263 ntBASIC3.98□□□□□ -1.77
CD40LGP29965 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CD40LGP29965 C4BPAP1-201ENST00000415474 1893 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms