Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.62□□□□□ -1.51
POLR2AP24928 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.61□□□□□ -1.51
POLR2AP24928 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
POLR2AP24928 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
POLR2AP24928 AC005005.4-201ENST00000623789 16698 ntBASIC5.61□□□□□ -1.51
POLR2AP24928 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
POLR2AP24928 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
POLR2AP24928 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
POLR2AP24928 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
POLR2AP24928 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
POLR2AP24928 SNORA70C-201ENST00000384538 135 ntBASIC5.61□□□□□ -1.51
POLR2AP24928 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.61□□□□□ -1.51
POLR2AP24928 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
POLR2AP24928 RN7SKP16-201ENST00000410180 299 ntBASIC5.61□□□□□ -1.51
POLR2AP24928 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.61□□□□□ -1.51
POLR2AP24928 THAP5P1-201ENST00000439089 262 ntBASIC5.61□□□□□ -1.51
POLR2AP24928 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
POLR2AP24928 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.61□□□□□ -1.51
POLR2AP24928 EEF1A1P1-201ENST00000447052 739 ntBASIC5.61□□□□□ -1.51
POLR2AP24928 HMGB1P26-201ENST00000452520 628 ntBASIC5.61□□□□□ -1.51
POLR2AP24928 ABCC13-202ENST00000463099 3842 ntBASIC5.61□□□□□ -1.51
POLR2AP24928 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.61□□□□□ -1.51
POLR2AP24928 RPL21P47-201ENST00000483696 477 ntBASIC5.61□□□□□ -1.51
POLR2AP24928 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.61□□□□□ -1.51
POLR2AP24928 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.61□□□□□ -1.51
POLR2AP24928 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.61□□□□□ -1.51
POLR2AP24928 AC027369.5-201ENST00000533838 755 ntBASIC5.61□□□□□ -1.51
POLR2AP24928 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
POLR2AP24928 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.61□□□□□ -1.51
POLR2AP24928 AC012409.3-201ENST00000611343 981 ntBASIC5.61□□□□□ -1.51
POLR2AP24928 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.61□□□□□ -1.51
POLR2AP24928 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
POLR2AP24928 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
POLR2AP24928 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
POLR2AP24928 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.61□□□□□ -1.51
POLR2AP24928 AC025574.1-201ENST00000554784 1653 ntBASIC5.61□□□□□ -1.51
POLR2AP24928 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
POLR2AP24928 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.61□□□□□ -1.51
POLR2AP24928 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.61□□□□□ -1.51
POLR2AP24928 OR14L1P-202ENST00000641545 3009 ntBASIC5.61□□□□□ -1.51
POLR2AP24928 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.6□□□□□ -1.51
POLR2AP24928 SNORD116-12-201ENST00000384468 92 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 AL022722.2-201ENST00000402519 180 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 GLUD1P9-201ENST00000420997 1173 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.6□□□□□ -1.51
POLR2AP24928 AL359265.1-201ENST00000440296 795 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 AL358794.1-201ENST00000445689 381 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.6□□□□□ -1.51
POLR2AP24928 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
POLR2AP24928 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.6□□□□□ -1.51
POLR2AP24928 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.6□□□□□ -1.51
POLR2AP24928 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
POLR2AP24928 CYB5AP5-201ENST00000549779 389 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 AC024909.2-201ENST00000553035 286 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.6□□□□□ -1.51
POLR2AP24928 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.6□□□□□ -1.51
POLR2AP24928 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.6□□□□□ -1.51
POLR2AP24928 ARF4P1-201ENST00000605447 541 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 AC124312.4-201ENST00000605533 310 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 AC006927.2-201ENST00000639256 389 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.6□□□□□ -1.51
POLR2AP24928 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
POLR2AP24928 AC099654.3-201ENST00000447087 1546 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
POLR2AP24928 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.6□□□□□ -1.51
POLR2AP24928 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
POLR2AP24928 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.6□□□□□ -1.51
POLR2AP24928 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
POLR2AP24928 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.6□□□□□ -1.51
POLR2AP24928 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
POLR2AP24928 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
POLR2AP24928 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.6□□□□□ -1.51
POLR2AP24928 RNU6-618P-201ENST00000363518 112 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 RNU6-1214P-201ENST00000363650 109 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 RNU1-130P-201ENST00000363930 160 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
POLR2AP24928 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
POLR2AP24928 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.6□□□□□ -1.51
POLR2AP24928 TRGV6-201ENST00000417928 299 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 AC140479.3-201ENST00000418944 1126 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 RPS3AP37-201ENST00000419176 745 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 USP9YP26-201ENST00000421008 661 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 RPS3AP44-201ENST00000425466 790 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.6□□□□□ -1.51
POLR2AP24928 AC000041.1-201ENST00000439655 175 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
POLR2AP24928 NUTF2P3-201ENST00000448540 384 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.6□□□□□ -1.51
POLR2AP24928 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.6□□□□□ -1.51
POLR2AP24928 SYT14P1-201ENST00000481459 721 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.6□□□□□ -1.51
POLR2AP24928 AC091868.1-201ENST00000508746 304 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 AC015795.1-201ENST00000513669 327 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 SNORA19.3-201ENST00000516165 130 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
POLR2AP24928 CBX3P7-201ENST00000532876 502 ntBASIC5.6□□□□□ -1.51
POLR2AP24928 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.6□□□□□ -1.51
POLR2AP24928 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms