Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.58□□□□□ -1.36
NFKB1P19838 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NFKB1P19838 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.57□□□□□ -1.36
NFKB1P19838 CASC19-221ENST00000641309 1382 ntBASIC6.57□□□□□ -1.36
NFKB1P19838 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NFKB1P19838 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.57□□□□□ -1.36
NFKB1P19838 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.57□□□□□ -1.36
NFKB1P19838 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NFKB1P19838 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NFKB1P19838 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.57□□□□□ -1.36
NFKB1P19838 AC011455.2-201ENST00000599320 3336 ntBASIC6.57□□□□□ -1.36
NFKB1P19838 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.57□□□□□ -1.36
NFKB1P19838 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
NFKB1P19838 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NFKB1P19838 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.57□□□□□ -1.36
NFKB1P19838 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NFKB1P19838 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
NFKB1P19838 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NFKB1P19838 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
NFKB1P19838 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NFKB1P19838 GNG5P1-201ENST00000255500 204 ntBASIC6.57□□□□□ -1.36
NFKB1P19838 OR11H4-201ENST00000315409 1082 ntBASIC6.57□□□□□ -1.36
NFKB1P19838 MIR506-201ENST00000384998 124 ntBASIC6.57□□□□□ -1.36
NFKB1P19838 RPS27AP6-201ENST00000427962 448 ntBASIC6.57□□□□□ -1.36
NFKB1P19838 RPL7P4-203ENST00000430239 730 ntBASIC6.57□□□□□ -1.36
NFKB1P19838 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.57□□□□□ -1.36
NFKB1P19838 AC234771.4-201ENST00000441416 730 ntBASIC6.57□□□□□ -1.36
NFKB1P19838 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC6.57□□□□□ -1.36
NFKB1P19838 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.57□□□□□ -1.36
NFKB1P19838 RPS27P23-201ENST00000487608 251 ntBASIC6.57□□□□□ -1.36
NFKB1P19838 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.57□□□□□ -1.36
NFKB1P19838 AC093664.1-201ENST00000511779 289 ntBASIC6.57□□□□□ -1.36
NFKB1P19838 Y_RNA.672-201ENST00000516289 104 ntBASIC6.57□□□□□ -1.36
NFKB1P19838 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC6.57□□□□□ -1.36
NFKB1P19838 COX6B1P4-201ENST00000519826 484 ntBASIC6.57□□□□□ -1.36
NFKB1P19838 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NFKB1P19838 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.57□□□□□ -1.36
NFKB1P19838 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC6.57□□□□□ -1.36
NFKB1P19838 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.57□□□□□ -1.36
NFKB1P19838 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.57□□□□□ -1.36
NFKB1P19838 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.57□□□□□ -1.36
NFKB1P19838 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NFKB1P19838 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.57□□□□□ -1.36
NFKB1P19838 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.57□□□□□ -1.36
NFKB1P19838 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.57□□□□□ -1.36
NFKB1P19838 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC6.57□□□□□ -1.36
NFKB1P19838 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.57□□□□□ -1.36
NFKB1P19838 AC036176.3-201ENST00000602456 418 ntBASIC6.57□□□□□ -1.36
NFKB1P19838 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.57□□□□□ -1.36
NFKB1P19838 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.57□□□□□ -1.36
NFKB1P19838 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.57□□□□□ -1.36
NFKB1P19838 RNU6ATAC35P-201ENST00000609276 444 ntBASIC6.57□□□□□ -1.36
NFKB1P19838 AC023509.5-201ENST00000617434 807 ntBASIC6.57□□□□□ -1.36
NFKB1P19838 AC068722.2-201ENST00000618734 544 ntBASIC6.57□□□□□ -1.36
NFKB1P19838 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.57□□□□□ -1.36
NFKB1P19838 AP006248.2-201ENST00000623309 592 ntBASIC6.57□□□□□ -1.36
NFKB1P19838 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NFKB1P19838 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NFKB1P19838 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NFKB1P19838 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NFKB1P19838 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NFKB1P19838 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NFKB1P19838 AC105235.1-201ENST00000623208 1816 ntBASIC6.57□□□□□ -1.36
NFKB1P19838 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NFKB1P19838 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.57□□□□□ -1.36
NFKB1P19838 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.57□□□□□ -1.36
NFKB1P19838 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NFKB1P19838 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NFKB1P19838 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NFKB1P19838 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.56□□□□□ -1.36
NFKB1P19838 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NFKB1P19838 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NFKB1P19838 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
NFKB1P19838 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
NFKB1P19838 ZNF658B-201ENST00000602828 3408 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NFKB1P19838 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.56□□□□□ -1.36
NFKB1P19838 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NFKB1P19838 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
NFKB1P19838 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
NFKB1P19838 Y_RNA.144-201ENST00000363521 113 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 Y_RNA.216-201ENST00000364205 93 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 SNORA63C-201ENST00000364578 129 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 SNORA62.2-201ENST00000364672 152 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
NFKB1P19838 AL391419.1-201ENST00000398901 1275 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.56□□□□□ -1.36
NFKB1P19838 AL122016.1-201ENST00000403365 367 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 U3.43-201ENST00000410734 213 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 RPL12P9-201ENST00000412942 488 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.56□□□□□ -1.36
NFKB1P19838 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.56□□□□□ -1.36
NFKB1P19838 RPL22P17-201ENST00000438729 315 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 SPRYD7P1-201ENST00000443861 570 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 MRPL50P4-201ENST00000446432 475 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC6.56□□□□□ -1.36
NFKB1P19838 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.56□□□□□ -1.36
NFKB1P19838 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.56□□□□□ -1.36
NFKB1P19838 VN1R38P-201ENST00000450265 887 ntBASIC6.56□□□□□ -1.36
NFKB1P19838 AC015724.1-201ENST00000478577 156 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms