Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC005191.1-201ENST00000603950 358 ntBASIC4.49□□□□□ -1.69
XRCC1P18887 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.49□□□□□ -1.69
XRCC1P18887 AL023583.1-201ENST00000607518 1143 ntBASIC4.49□□□□□ -1.69
XRCC1P18887 AC005021.1-201ENST00000608730 355 ntBASIC4.49□□□□□ -1.69
XRCC1P18887 AC239803.2-201ENST00000610161 430 ntBASIC4.49□□□□□ -1.69
XRCC1P18887 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
XRCC1P18887 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
XRCC1P18887 AL355852.1-201ENST00000454081 1771 ntBASIC4.49□□□□□ -1.69
XRCC1P18887 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
XRCC1P18887 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.49□□□□□ -1.69
XRCC1P18887 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.49□□□□□ -1.69
XRCC1P18887 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
XRCC1P18887 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
XRCC1P18887 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
XRCC1P18887 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
XRCC1P18887 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
XRCC1P18887 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
XRCC1P18887 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.48□□□□□ -1.69
XRCC1P18887 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.48□□□□□ -1.69
XRCC1P18887 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.48□□□□□ -1.69
XRCC1P18887 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.48□□□□□ -1.69
XRCC1P18887 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
XRCC1P18887 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
XRCC1P18887 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
XRCC1P18887 AL137100.1-201ENST00000556703 1620 ntBASIC4.48□□□□□ -1.69
XRCC1P18887 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
XRCC1P18887 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
XRCC1P18887 ELOCP19-201ENST00000411919 318 ntBASIC4.48□□□□□ -1.69
XRCC1P18887 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.48□□□□□ -1.69
XRCC1P18887 RPEP3-201ENST00000425462 676 ntBASIC4.48□□□□□ -1.69
XRCC1P18887 MTCYBP29-201ENST00000436327 1006 ntBASIC4.48□□□□□ -1.69
XRCC1P18887 Z99127.2-201ENST00000441426 334 ntBASIC4.48□□□□□ -1.69
XRCC1P18887 ISCUP1-201ENST00000454451 448 ntBASIC4.48□□□□□ -1.69
XRCC1P18887 RPL23AP65-201ENST00000475608 468 ntBASIC4.48□□□□□ -1.69
XRCC1P18887 AC113430.1-201ENST00000506872 718 ntBASIC4.48□□□□□ -1.69
XRCC1P18887 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.48□□□□□ -1.69
XRCC1P18887 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
XRCC1P18887 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.48□□□□□ -1.69
XRCC1P18887 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
XRCC1P18887 OR8X1P-201ENST00000534542 869 ntBASIC4.48□□□□□ -1.69
XRCC1P18887 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.48□□□□□ -1.69
XRCC1P18887 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.48□□□□□ -1.69
XRCC1P18887 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.48□□□□□ -1.69
XRCC1P18887 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.48□□□□□ -1.69
XRCC1P18887 RPL12P25-202ENST00000598100 674 ntBASIC4.48□□□□□ -1.69
XRCC1P18887 RPL26P30-202ENST00000602923 645 ntBASIC4.48□□□□□ -1.69
XRCC1P18887 MTCO2P22-201ENST00000603246 681 ntBASIC4.48□□□□□ -1.69
XRCC1P18887 AC008782.1-201ENST00000603386 430 ntBASIC4.48□□□□□ -1.69
XRCC1P18887 AP004372.1-201ENST00000604842 844 ntBASIC4.48□□□□□ -1.69
XRCC1P18887 AL133243.1-201ENST00000614487 366 ntBASIC4.48□□□□□ -1.69
XRCC1P18887 LINC00901.1-201ENST00000617252 152 ntBASIC4.48□□□□□ -1.69
XRCC1P18887 AC009704.2-201ENST00000618739 483 ntBASIC4.48□□□□□ -1.69
XRCC1P18887 AP005019.3-201ENST00000620418 560 ntBASIC4.48□□□□□ -1.69
XRCC1P18887 AC019080.5-201ENST00000624891 757 ntBASIC4.48□□□□□ -1.69
XRCC1P18887 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.48□□□□□ -1.69
XRCC1P18887 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
XRCC1P18887 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
XRCC1P18887 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
XRCC1P18887 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.48□□□□□ -1.69
XRCC1P18887 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
XRCC1P18887 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
XRCC1P18887 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
XRCC1P18887 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
XRCC1P18887 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.47□□□□□ -1.69
XRCC1P18887 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
XRCC1P18887 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
XRCC1P18887 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.47□□□□□ -1.69
XRCC1P18887 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
XRCC1P18887 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
XRCC1P18887 RNU6-152P-201ENST00000384037 107 ntBASIC4.47□□□□□ -1.69
XRCC1P18887 MT-TP-201ENST00000387461 68 ntBASIC4.47□□□□□ -1.69
XRCC1P18887 AL589655.1-201ENST00000405398 482 ntBASIC4.47□□□□□ -1.69
XRCC1P18887 AL136131.1-201ENST00000406079 803 ntBASIC4.47□□□□□ -1.69
XRCC1P18887 AL160275.2-201ENST00000412010 394 ntBASIC4.47□□□□□ -1.69
XRCC1P18887 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.47□□□□□ -1.69
XRCC1P18887 RPL21P43-201ENST00000425440 472 ntBASIC4.47□□□□□ -1.69
XRCC1P18887 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.47□□□□□ -1.69
XRCC1P18887 AL606490.7-201ENST00000433136 191 ntBASIC4.47□□□□□ -1.69
XRCC1P18887 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.47□□□□□ -1.69
XRCC1P18887 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.47□□□□□ -1.69
XRCC1P18887 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
XRCC1P18887 MTND2P28-201ENST00000457540 1044 ntBASIC4.47□□□□□ -1.69
XRCC1P18887 AC108022.1-201ENST00000493466 478 ntBASIC4.47□□□□□ -1.69
XRCC1P18887 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.47□□□□□ -1.69
XRCC1P18887 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.47□□□□□ -1.69
XRCC1P18887 AC067904.2-201ENST00000517322 1283 ntBASIC4.47□□□□□ -1.69
XRCC1P18887 AC034205.1-201ENST00000520621 638 ntBASIC4.47□□□□□ -1.69
XRCC1P18887 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.47□□□□□ -1.69
XRCC1P18887 AL121834.1-201ENST00000572284 509 ntBASIC4.47□□□□□ -1.69
XRCC1P18887 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.47□□□□□ -1.69
XRCC1P18887 AC084373.1-201ENST00000603311 235 ntBASIC4.47□□□□□ -1.69
XRCC1P18887 AC115286.1-201ENST00000604298 434 ntBASIC4.47□□□□□ -1.69
XRCC1P18887 AC073111.2-201ENST00000605657 1075 ntBASIC4.47□□□□□ -1.69
XRCC1P18887 AC034236.3-201ENST00000605999 461 ntBASIC4.47□□□□□ -1.69
XRCC1P18887 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
XRCC1P18887 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
XRCC1P18887 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.47□□□□□ -1.69
XRCC1P18887 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.47□□□□□ -1.69
XRCC1P18887 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.47□□□□□ -1.69
XRCC1P18887 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms