Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC106883.1-201ENST00000418805 562 ntBASIC5.2□□□□□ -1.58
MMP3P08254 GAPDHP49-201ENST00000421421 961 ntBASIC5.2□□□□□ -1.58
MMP3P08254 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.2□□□□□ -1.58
MMP3P08254 AL160175.1-201ENST00000428124 247 ntBASIC5.2□□□□□ -1.58
MMP3P08254 RPL35AP21-201ENST00000437667 333 ntBASIC5.2□□□□□ -1.58
MMP3P08254 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.2□□□□□ -1.58
MMP3P08254 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MMP3P08254 DUXAP8-207ENST00000456786 622 ntBASIC5.2□□□□□ -1.58
MMP3P08254 SYT14P1-201ENST00000481459 721 ntBASIC5.2□□□□□ -1.58
MMP3P08254 AC025164.1-201ENST00000496249 478 ntBASIC5.2□□□□□ -1.58
MMP3P08254 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MMP3P08254 AC133963.2-201ENST00000513686 578 ntBASIC5.2□□□□□ -1.58
MMP3P08254 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.2□□□□□ -1.58
MMP3P08254 SNORA19.3-201ENST00000516165 130 ntBASIC5.2□□□□□ -1.58
MMP3P08254 AC010476.1-201ENST00000519111 851 ntBASIC5.2□□□□□ -1.58
MMP3P08254 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.2□□□□□ -1.58
MMP3P08254 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.2□□□□□ -1.58
MMP3P08254 AC087894.1-201ENST00000538359 518 ntBASIC5.2□□□□□ -1.58
MMP3P08254 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MMP3P08254 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.2□□□□□ -1.58
MMP3P08254 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.2□□□□□ -1.58
MMP3P08254 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
MMP3P08254 AC104229.1-201ENST00000561364 255 ntBASIC5.2□□□□□ -1.58
MMP3P08254 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.2□□□□□ -1.58
MMP3P08254 AGGF1P5-201ENST00000567900 919 ntBASIC5.2□□□□□ -1.58
MMP3P08254 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.2□□□□□ -1.58
MMP3P08254 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.2□□□□□ -1.58
MMP3P08254 AP000919.1-202ENST00000581139 1264 ntBASIC5.2□□□□□ -1.58
MMP3P08254 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.2□□□□□ -1.58
MMP3P08254 AC006116.5-201ENST00000591936 559 ntBASIC5.2□□□□□ -1.58
MMP3P08254 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.2□□□□□ -1.58
MMP3P08254 AC021851.1-201ENST00000608537 1082 ntBASIC5.2□□□□□ -1.58
MMP3P08254 AC012409.3-201ENST00000611343 981 ntBASIC5.2□□□□□ -1.58
MMP3P08254 DUXAP10-204ENST00000612052 616 ntBASIC5.2□□□□□ -1.58
MMP3P08254 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MMP3P08254 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.2□□□□□ -1.58
MMP3P08254 AL356863.1-201ENST00000623378 1080 ntBASIC5.2□□□□□ -1.58
MMP3P08254 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.2□□□□□ -1.58
MMP3P08254 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
MMP3P08254 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
MMP3P08254 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.2□□□□□ -1.58
MMP3P08254 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
MMP3P08254 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MMP3P08254 MFSD8-220ENST00000641243 1422 ntBASIC5.2□□□□□ -1.58
MMP3P08254 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MMP3P08254 AC019072.1-201ENST00000604535 1551 ntBASIC5.2□□□□□ -1.58
MMP3P08254 AC108467.2-201ENST00000617640 1597 ntBASIC5.2□□□□□ -1.58
MMP3P08254 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
MMP3P08254 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.2□□□□□ -1.58
MMP3P08254 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
MMP3P08254 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MMP3P08254 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MMP3P08254 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MMP3P08254 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MMP3P08254 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
MMP3P08254 AL121950.1-201ENST00000624993 2077 ntBASIC5.19□□□□□ -1.58
MMP3P08254 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.19□□□□□ -1.58
MMP3P08254 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MMP3P08254 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MMP3P08254 RNA5SP479-201ENST00000364858 117 ntBASIC5.19□□□□□ -1.58
MMP3P08254 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.19□□□□□ -1.58
MMP3P08254 Z98745.1-201ENST00000402553 494 ntBASIC5.19□□□□□ -1.58
MMP3P08254 AL355615.1-201ENST00000406187 641 ntBASIC5.19□□□□□ -1.58
MMP3P08254 BTF3P9-201ENST00000418784 283 ntBASIC5.19□□□□□ -1.58
MMP3P08254 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.19□□□□□ -1.58
MMP3P08254 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.19□□□□□ -1.58
MMP3P08254 RPL7AP25-201ENST00000423357 805 ntBASIC5.19□□□□□ -1.58
MMP3P08254 RGS17P1-201ENST00000423358 553 ntBASIC5.19□□□□□ -1.58
MMP3P08254 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.19□□□□□ -1.58
MMP3P08254 RPL5P2-201ENST00000429598 854 ntBASIC5.19□□□□□ -1.58
MMP3P08254 MTCO1P43-201ENST00000431831 488 ntBASIC5.19□□□□□ -1.58
MMP3P08254 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.19□□□□□ -1.58
MMP3P08254 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.19□□□□□ -1.58
MMP3P08254 CBX1P1-201ENST00000440184 427 ntBASIC5.19□□□□□ -1.58
MMP3P08254 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.19□□□□□ -1.58
MMP3P08254 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.19□□□□□ -1.58
MMP3P08254 AL009048.1-201ENST00000450437 298 ntBASIC5.19□□□□□ -1.58
MMP3P08254 HMGB1P26-201ENST00000452520 628 ntBASIC5.19□□□□□ -1.58
MMP3P08254 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.19□□□□□ -1.58
MMP3P08254 AC245028.2-201ENST00000458673 253 ntBASIC5.19□□□□□ -1.58
MMP3P08254 snoU109.3-201ENST00000459477 145 ntBASIC5.19□□□□□ -1.58
MMP3P08254 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MMP3P08254 PPIAP21-201ENST00000464473 501 ntBASIC5.19□□□□□ -1.58
MMP3P08254 AC021660.1-201ENST00000465006 554 ntBASIC5.19□□□□□ -1.58
MMP3P08254 AC090602.1-201ENST00000469695 252 ntBASIC5.19□□□□□ -1.58
MMP3P08254 AC109327.1-201ENST00000471666 403 ntBASIC5.19□□□□□ -1.58
MMP3P08254 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.19□□□□□ -1.58
MMP3P08254 BTG4P1-201ENST00000510421 183 ntBASIC5.19□□□□□ -1.58
MMP3P08254 MTND2P32-201ENST00000521584 1038 ntBASIC5.19□□□□□ -1.58
MMP3P08254 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MMP3P08254 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.19□□□□□ -1.58
MMP3P08254 AP000916.1-201ENST00000533869 835 ntBASIC5.19□□□□□ -1.58
MMP3P08254 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.19□□□□□ -1.58
MMP3P08254 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.19□□□□□ -1.58
MMP3P08254 AC023575.1-201ENST00000580510 358 ntBASIC5.19□□□□□ -1.58
MMP3P08254 AC124016.2-201ENST00000610058 665 ntBASIC5.19□□□□□ -1.58
MMP3P08254 AL035461.2-201ENST00000619201 524 ntBASIC5.19□□□□□ -1.58
MMP3P08254 AP005019.3-201ENST00000620418 560 ntBASIC5.19□□□□□ -1.58
MMP3P08254 AC092159.4-201ENST00000624944 550 ntBASIC5.19□□□□□ -1.58
MMP3P08254 FRG1EP-201ENST00000634469 770 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms