Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.13□□□□□ -1.59
RB1P06400 AC079610.2-201ENST00000604818 690 ntBASIC5.13□□□□□ -1.59
RB1P06400 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.13□□□□□ -1.59
RB1P06400 AC100847.1-201ENST00000611316 481 ntBASIC5.13□□□□□ -1.59
RB1P06400 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RB1P06400 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.13□□□□□ -1.59
RB1P06400 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.13□□□□□ -1.59
RB1P06400 AC011815.3-201ENST00000624194 473 ntBASIC5.13□□□□□ -1.59
RB1P06400 AP003497.2-201ENST00000624220 967 ntBASIC5.13□□□□□ -1.59
RB1P06400 AL049536.1-201ENST00000625043 744 ntBASIC5.13□□□□□ -1.59
RB1P06400 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.13□□□□□ -1.59
RB1P06400 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.13□□□□□ -1.59
RB1P06400 AL442639.1-201ENST00000625030 1899 ntBASIC5.13□□□□□ -1.59
RB1P06400 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
RB1P06400 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
RB1P06400 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
RB1P06400 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.13□□□□□ -1.59
RB1P06400 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.13□□□□□ -1.59
RB1P06400 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.13□□□□□ -1.59
RB1P06400 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RB1P06400 ZFRP1-201ENST00000457579 2970 ntBASIC5.12□□□□□ -1.59
RB1P06400 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.12□□□□□ -1.59
RB1P06400 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.12□□□□□ -1.59
RB1P06400 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RB1P06400 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RB1P06400 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RB1P06400 RNA5SP509-201ENST00000364577 119 ntBASIC5.12□□□□□ -1.59
RB1P06400 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RB1P06400 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RB1P06400 SNORA68.2-201ENST00000391263 128 ntBASIC5.12□□□□□ -1.59
RB1P06400 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RB1P06400 UBE2V1P11-201ENST00000411559 285 ntBASIC5.12□□□□□ -1.59
RB1P06400 COX5BP7-201ENST00000414780 274 ntBASIC5.12□□□□□ -1.59
RB1P06400 MTCO3P4-201ENST00000419236 787 ntBASIC5.12□□□□□ -1.59
RB1P06400 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.12□□□□□ -1.59
RB1P06400 FO393419.3-201ENST00000428741 282 ntBASIC5.12□□□□□ -1.59
RB1P06400 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.12□□□□□ -1.59
RB1P06400 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.12□□□□□ -1.59
RB1P06400 AC097499.1-201ENST00000444277 208 ntBASIC5.12□□□□□ -1.59
RB1P06400 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RB1P06400 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.12□□□□□ -1.59
RB1P06400 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.12□□□□□ -1.59
RB1P06400 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.12□□□□□ -1.59
RB1P06400 OR52E3P-201ENST00000452083 936 ntBASIC5.12□□□□□ -1.59
RB1P06400 AL691482.1-201ENST00000453255 87 ntBASIC5.12□□□□□ -1.59
RB1P06400 RPL32P14-201ENST00000463196 378 ntBASIC5.12□□□□□ -1.59
RB1P06400 AC109327.1-201ENST00000471666 403 ntBASIC5.12□□□□□ -1.59
RB1P06400 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.12□□□□□ -1.59
RB1P06400 SETP6-201ENST00000479329 568 ntBASIC5.12□□□□□ -1.59
RB1P06400 AC121161.1-201ENST00000510606 652 ntBASIC5.12□□□□□ -1.59
RB1P06400 AC015795.1-201ENST00000513669 327 ntBASIC5.12□□□□□ -1.59
RB1P06400 RNU6-513P-201ENST00000516104 104 ntBASIC5.12□□□□□ -1.59
RB1P06400 snoU109.6-201ENST00000516831 118 ntBASIC5.12□□□□□ -1.59
RB1P06400 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.12□□□□□ -1.59
RB1P06400 AC027369.5-201ENST00000533838 755 ntBASIC5.12□□□□□ -1.59
RB1P06400 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RB1P06400 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.12□□□□□ -1.59
RB1P06400 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.12□□□□□ -1.59
RB1P06400 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RB1P06400 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.12□□□□□ -1.59
RB1P06400 AL049839.1-201ENST00000556151 657 ntBASIC5.12□□□□□ -1.59
RB1P06400 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.12□□□□□ -1.59
RB1P06400 AC007224.1-201ENST00000564410 144 ntBASIC5.12□□□□□ -1.59
RB1P06400 RN7SL652P-201ENST00000577769 300 ntBASIC5.12□□□□□ -1.59
RB1P06400 AC023575.1-201ENST00000580510 358 ntBASIC5.12□□□□□ -1.59
RB1P06400 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.12□□□□□ -1.59
RB1P06400 AC018695.5-201ENST00000605872 315 ntBASIC5.12□□□□□ -1.59
RB1P06400 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.12□□□□□ -1.59
RB1P06400 AC011374.2-201ENST00000607135 526 ntBASIC5.12□□□□□ -1.59
RB1P06400 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RB1P06400 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.12□□□□□ -1.59
RB1P06400 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RB1P06400 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RB1P06400 AC093311.1-201ENST00000506586 2021 ntBASIC5.12□□□□□ -1.59
RB1P06400 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RB1P06400 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RB1P06400 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
RB1P06400 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RB1P06400 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
RB1P06400 AC107027.3-201ENST00000565095 3473 ntBASIC5.11□□□□□ -1.59
RB1P06400 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RB1P06400 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
RB1P06400 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RB1P06400 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
RB1P06400 AC021242.1-201ENST00000507315 2035 ntBASIC5.11□□□□□ -1.59
RB1P06400 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
RB1P06400 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RB1P06400 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RB1P06400 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RB1P06400 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RB1P06400 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RB1P06400 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RB1P06400 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RB1P06400 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.11□□□□□ -1.59
RB1P06400 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RB1P06400 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RB1P06400 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RB1P06400 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RB1P06400 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.11□□□□□ -1.59
RB1P06400 RNU6-1005P-201ENST00000384519 107 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms