Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC008785.1-201ENST00000624475 456 ntBASIC4.22□□□□□ -1.73
HLA-DQB2P05538 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
HLA-DQB2P05538 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQB2P05538 AC010300.1-201ENST00000600671 5134 ntBASIC4.22□□□□□ -1.73
HLA-DQB2P05538 AC005261.4-201ENST00000600047 1385 ntBASIC4.22□□□□□ -1.73
HLA-DQB2P05538 AC116667.1-201ENST00000604855 2072 ntBASIC4.22□□□□□ -1.73
HLA-DQB2P05538 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQB2P05538 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.73
HLA-DQB2P05538 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.21□□□□□ -1.73
HLA-DQB2P05538 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQB2P05538 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQB2P05538 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQB2P05538 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQB2P05538 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQB2P05538 RPS27AP11-201ENST00000402798 447 ntBASIC4.21□□□□□ -1.74
HLA-DQB2P05538 AC006011.1-201ENST00000442758 349 ntBASIC4.21□□□□□ -1.74
HLA-DQB2P05538 AC073587.1-201ENST00000447093 876 ntBASIC4.21□□□□□ -1.74
HLA-DQB2P05538 AL591363.1-201ENST00000450091 483 ntBASIC4.21□□□□□ -1.74
HLA-DQB2P05538 AC002553.2-201ENST00000453217 340 ntBASIC4.21□□□□□ -1.74
HLA-DQB2P05538 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DQB2P05538 RN7SL585P-201ENST00000470538 280 ntBASIC4.21□□□□□ -1.74
HLA-DQB2P05538 RPS27AP13-201ENST00000498403 237 ntBASIC4.21□□□□□ -1.74
HLA-DQB2P05538 AC025554.1-201ENST00000505641 188 ntBASIC4.21□□□□□ -1.74
HLA-DQB2P05538 HPRT1P1-201ENST00000509498 657 ntBASIC4.21□□□□□ -1.74
HLA-DQB2P05538 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DQB2P05538 KRT19P6-201ENST00000510983 209 ntBASIC4.21□□□□□ -1.74
HLA-DQB2P05538 AP003730.1-201ENST00000524605 285 ntBASIC4.21□□□□□ -1.74
HLA-DQB2P05538 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DQB2P05538 AL358913.1-201ENST00000554342 121 ntBASIC4.21□□□□□ -1.74
HLA-DQB2P05538 AC119501.1-201ENST00000603646 475 ntBASIC4.21□□□□□ -1.74
HLA-DQB2P05538 MIR7151-201ENST00000617477 60 ntBASIC4.21□□□□□ -1.74
HLA-DQB2P05538 MIR8059-201ENST00000620427 81 ntBASIC4.21□□□□□ -1.74
HLA-DQB2P05538 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQB2P05538 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DQB2P05538 CASC19-255ENST00000641733 1385 ntBASIC4.21□□□□□ -1.74
HLA-DQB2P05538 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQB2P05538 AC091046.3-201ENST00000631455 1574 ntBASIC4.21□□□□□ -1.74
HLA-DQB2P05538 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQB2P05538 AC011266.1-201ENST00000624119 3569 ntBASIC4.21□□□□□ -1.74
HLA-DQB2P05538 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
HLA-DQB2P05538 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DQB2P05538 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HLA-DQB2P05538 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DQB2P05538 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DQB2P05538 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 ERCC6-202ENST00000374127 1782 ntBASIC4.2□□□□□ -1.74
HLA-DQB2P05538 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 RPL32P3-201ENST00000359025 275 ntBASIC4.2□□□□□ -1.74
HLA-DQB2P05538 RNA5SP388-201ENST00000362584 119 ntBASIC4.2□□□□□ -1.74
HLA-DQB2P05538 BMS1P3-201ENST00000372011 932 ntBASIC4.2□□□□□ -1.74
HLA-DQB2P05538 SNORA37-201ENST00000384504 129 ntBASIC4.2□□□□□ -1.74
HLA-DQB2P05538 ST13P16-201ENST00000401760 781 ntBASIC4.2□□□□□ -1.74
HLA-DQB2P05538 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 Y_RNA.625-201ENST00000411256 107 ntBASIC4.2□□□□□ -1.74
HLA-DQB2P05538 AL590806.1-201ENST00000415818 853 ntBASIC4.2□□□□□ -1.74
HLA-DQB2P05538 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 HMGB1P32-201ENST00000425971 565 ntBASIC4.2□□□□□ -1.74
HLA-DQB2P05538 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 AL450263.2-201ENST00000439400 589 ntBASIC4.2□□□□□ -1.74
HLA-DQB2P05538 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 AL589765.3-201ENST00000446084 462 ntBASIC4.2□□□□□ -1.74
HLA-DQB2P05538 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 NUTF2P3-201ENST00000448540 384 ntBASIC4.2□□□□□ -1.74
HLA-DQB2P05538 RPL36AP13-201ENST00000457490 317 ntBASIC4.2□□□□□ -1.74
HLA-DQB2P05538 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 AC112184.1-201ENST00000505179 312 ntBASIC4.2□□□□□ -1.74
HLA-DQB2P05538 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 AC007599.1-201ENST00000568688 1174 ntBASIC4.2□□□□□ -1.74
HLA-DQB2P05538 AC006116.5-201ENST00000591936 559 ntBASIC4.2□□□□□ -1.74
HLA-DQB2P05538 AC233280.2-201ENST00000603917 1070 ntBASIC4.2□□□□□ -1.74
HLA-DQB2P05538 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DQB2P05538 Z82217.1-201ENST00000625157 8149 ntBASIC4.19□□□□□ -1.74
HLA-DQB2P05538 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DQB2P05538 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DQB2P05538 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DQB2P05538 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DQB2P05538 RNU1-94P-201ENST00000362627 173 ntBASIC4.19□□□□□ -1.74
HLA-DQB2P05538 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DQB2P05538 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DQB2P05538 MIR513A2-201ENST00000385249 127 ntBASIC4.19□□□□□ -1.74
HLA-DQB2P05538 AC233289.1-201ENST00000403700 508 ntBASIC4.19□□□□□ -1.74
HLA-DQB2P05538 PGBD4P8-201ENST00000412993 562 ntBASIC4.19□□□□□ -1.74
HLA-DQB2P05538 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DQB2P05538 COX6CP15-201ENST00000426313 211 ntBASIC4.19□□□□□ -1.74
HLA-DQB2P05538 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DQB2P05538 TMX2P1-201ENST00000436507 708 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms