Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.92□□□□□ -1.62
COL4A1P02462 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.92□□□□□ -1.62
COL4A1P02462 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.92□□□□□ -1.62
COL4A1P02462 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.92□□□□□ -1.62
COL4A1P02462 RPS20P21-201ENST00000466859 343 ntBASIC4.92□□□□□ -1.62
COL4A1P02462 RPL5P12-201ENST00000477071 851 ntBASIC4.92□□□□□ -1.62
COL4A1P02462 AC025554.1-201ENST00000505641 188 ntBASIC4.92□□□□□ -1.62
COL4A1P02462 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.92□□□□□ -1.62
COL4A1P02462 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.92□□□□□ -1.62
COL4A1P02462 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.92□□□□□ -1.62
COL4A1P02462 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.92□□□□□ -1.62
COL4A1P02462 AC063950.1-201ENST00000552036 308 ntBASIC4.92□□□□□ -1.62
COL4A1P02462 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.92□□□□□ -1.62
COL4A1P02462 QTRT1P1-201ENST00000604344 1078 ntBASIC4.92□□□□□ -1.62
COL4A1P02462 AC090246.1-201ENST00000616499 426 ntBASIC4.92□□□□□ -1.62
COL4A1P02462 AC095038.2-201ENST00000621464 1070 ntBASIC4.92□□□□□ -1.62
COL4A1P02462 AL357559.1-201ENST00000622228 274 ntBASIC4.92□□□□□ -1.62
COL4A1P02462 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.92□□□□□ -1.62
COL4A1P02462 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL4A1P02462 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL4A1P02462 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL4A1P02462 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
COL4A1P02462 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL4A1P02462 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
COL4A1P02462 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.91□□□□□ -1.62
COL4A1P02462 MIR449B-201ENST00000384995 97 ntBASIC4.91□□□□□ -1.62
COL4A1P02462 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.91□□□□□ -1.62
COL4A1P02462 ARL4AP4-201ENST00000434170 518 ntBASIC4.91□□□□□ -1.62
COL4A1P02462 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.91□□□□□ -1.62
COL4A1P02462 RPL23AP89-201ENST00000439324 255 ntBASIC4.91□□□□□ -1.62
COL4A1P02462 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.91□□□□□ -1.62
COL4A1P02462 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.91□□□□□ -1.62
COL4A1P02462 RPL7P24-201ENST00000493052 752 ntBASIC4.91□□□□□ -1.62
COL4A1P02462 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.91□□□□□ -1.62
COL4A1P02462 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.91□□□□□ -1.62
COL4A1P02462 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC4.91□□□□□ -1.62
COL4A1P02462 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.91□□□□□ -1.62
COL4A1P02462 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.91□□□□□ -1.62
COL4A1P02462 AC079684.1-201ENST00000621405 437 ntBASIC4.91□□□□□ -1.62
COL4A1P02462 AC244100.1-202ENST00000621554 382 ntBASIC4.91□□□□□ -1.62
COL4A1P02462 MARK2P15-201ENST00000432204 2186 ntBASIC4.91□□□□□ -1.62
COL4A1P02462 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL4A1P02462 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL4A1P02462 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL4A1P02462 AC233968.1-201ENST00000611212 1300 ntBASIC4.91□□□□□ -1.62
COL4A1P02462 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.91□□□□□ -1.62
COL4A1P02462 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
COL4A1P02462 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
COL4A1P02462 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.91□□□□□ -1.62
COL4A1P02462 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.91□□□□□ -1.62
COL4A1P02462 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.91□□□□□ -1.62
COL4A1P02462 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL4A1P02462 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL4A1P02462 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL4A1P02462 DMD-228ENST00000541735 7080 ntTSL 5 BASIC4.9□□□□□ -1.62
COL4A1P02462 SNORD3H-201ENST00000384486 214 ntBASIC4.9□□□□□ -1.62
COL4A1P02462 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.9□□□□□ -1.62
COL4A1P02462 RPS21P8-201ENST00000413365 247 ntBASIC4.9□□□□□ -1.62
COL4A1P02462 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL4A1P02462 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.9□□□□□ -1.62
COL4A1P02462 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.9□□□□□ -1.62
COL4A1P02462 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.9□□□□□ -1.62
COL4A1P02462 RN7SKP141-201ENST00000516167 338 ntBASIC4.9□□□□□ -1.62
COL4A1P02462 AC109635.6-201ENST00000525487 1113 ntBASIC4.9□□□□□ -1.62
COL4A1P02462 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.9□□□□□ -1.62
COL4A1P02462 AC022968.1-201ENST00000567372 442 ntBASIC4.9□□□□□ -1.62
COL4A1P02462 AC079171.1-201ENST00000568788 914 ntBASIC4.9□□□□□ -1.62
COL4A1P02462 AL031666.3-201ENST00000609320 1006 ntBASIC4.9□□□□□ -1.62
COL4A1P02462 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL4A1P02462 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC4.9□□□□□ -1.62
COL4A1P02462 AL355596.1-201ENST00000565399 3996 ntBASIC4.9□□□□□ -1.62
COL4A1P02462 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL4A1P02462 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
COL4A1P02462 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL4A1P02462 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
COL4A1P02462 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL4A1P02462 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL4A1P02462 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL4A1P02462 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL4A1P02462 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A1P02462 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A1P02462 SNORA9-201ENST00000384215 133 ntBASIC4.89□□□□□ -1.63
COL4A1P02462 NPM1P37-201ENST00000403105 874 ntBASIC4.89□□□□□ -1.63
COL4A1P02462 PGBD4P8-201ENST00000412993 562 ntBASIC4.89□□□□□ -1.63
COL4A1P02462 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.89□□□□□ -1.63
COL4A1P02462 NPM1P34-201ENST00000428821 893 ntBASIC4.89□□□□□ -1.63
COL4A1P02462 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.89□□□□□ -1.63
COL4A1P02462 RAD23BP3-201ENST00000454157 1152 ntBASIC4.89□□□□□ -1.63
COL4A1P02462 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.89□□□□□ -1.63
COL4A1P02462 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.89□□□□□ -1.63
COL4A1P02462 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.89□□□□□ -1.63
COL4A1P02462 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.89□□□□□ -1.63
COL4A1P02462 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
COL4A1P02462 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
COL4A1P02462 AL627171.1-201ENST00000618845 1308 ntBASIC4.89□□□□□ -1.63
COL4A1P02462 AL049781.1-201ENST00000623195 3585 ntBASIC4.89□□□□□ -1.63
COL4A1P02462 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.89□□□□□ -1.63
COL4A1P02462 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A1P02462 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A1P02462 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms