Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL1A1P02452 AC012442.3-202ENST00000636742 206 ntBASIC5.04□□□□□ -1.6
COL1A1P02452 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.04□□□□□ -1.6
COL1A1P02452 TCP1P3-201ENST00000414406 1498 ntBASIC5.04□□□□□ -1.6
COL1A1P02452 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.04□□□□□ -1.6
COL1A1P02452 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.04□□□□□ -1.6
COL1A1P02452 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL1A1P02452 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL1A1P02452 AL079305.1-201ENST00000623159 3008 ntBASIC5.04□□□□□ -1.6
COL1A1P02452 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL1A1P02452 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL1A1P02452 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL1A1P02452 CASC19-261ENST00000641853 1638 ntBASIC5.03□□□□□ -1.6
COL1A1P02452 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
COL1A1P02452 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.03□□□□□ -1.6
COL1A1P02452 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
COL1A1P02452 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
COL1A1P02452 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
COL1A1P02452 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
COL1A1P02452 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.03□□□□□ -1.6
COL1A1P02452 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.03□□□□□ -1.6
COL1A1P02452 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL1A1P02452 AL139039.2-201ENST00000407436 479 ntBASIC5.03□□□□□ -1.6
COL1A1P02452 AL035246.1-201ENST00000433554 1255 ntBASIC5.03□□□□□ -1.6
COL1A1P02452 AC006011.1-201ENST00000442758 349 ntBASIC5.03□□□□□ -1.6
COL1A1P02452 RPL6P5-201ENST00000445678 828 ntBASIC5.03□□□□□ -1.6
COL1A1P02452 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.03□□□□□ -1.6
COL1A1P02452 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.03□□□□□ -1.6
COL1A1P02452 AP005901.4-201ENST00000577336 569 ntBASIC5.03□□□□□ -1.6
COL1A1P02452 MIR3944-201ENST00000581277 108 ntBASIC5.03□□□□□ -1.6
COL1A1P02452 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.03□□□□□ -1.6
COL1A1P02452 BNIP3P41-202ENST00000616656 861 ntBASIC5.03□□□□□ -1.6
COL1A1P02452 AC019278.1-201ENST00000623516 479 ntBASIC5.03□□□□□ -1.6
COL1A1P02452 AC004777.1-201ENST00000624317 287 ntBASIC5.03□□□□□ -1.6
COL1A1P02452 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL1A1P02452 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL1A1P02452 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL1A1P02452 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
COL1A1P02452 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL1A1P02452 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL1A1P02452 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
COL1A1P02452 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
COL1A1P02452 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL1A1P02452 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL1A1P02452 RNU6-525P-201ENST00000363685 104 ntBASIC5.02□□□□□ -1.61
COL1A1P02452 MIR195-201ENST00000385194 87 ntBASIC5.02□□□□□ -1.61
COL1A1P02452 RNA5SP372-201ENST00000390836 115 ntBASIC5.02□□□□□ -1.61
COL1A1P02452 RNU4-6P-201ENST00000410804 122 ntBASIC5.02□□□□□ -1.61
COL1A1P02452 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.02□□□□□ -1.61
COL1A1P02452 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.02□□□□□ -1.61
COL1A1P02452 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.02□□□□□ -1.61
COL1A1P02452 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL1A1P02452 RPL23AP65-201ENST00000475608 468 ntBASIC5.02□□□□□ -1.61
COL1A1P02452 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.02□□□□□ -1.61
COL1A1P02452 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.02□□□□□ -1.61
COL1A1P02452 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.02□□□□□ -1.61
COL1A1P02452 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.02□□□□□ -1.61
COL1A1P02452 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.02□□□□□ -1.61
COL1A1P02452 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL1A1P02452 AC107993.1-201ENST00000591343 684 ntBASIC5.02□□□□□ -1.61
COL1A1P02452 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.02□□□□□ -1.61
COL1A1P02452 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.02□□□□□ -1.61
COL1A1P02452 PCA3_2.1-201ENST00000612507 409 ntBASIC5.02□□□□□ -1.61
COL1A1P02452 AC243756.2-201ENST00000618406 463 ntBASIC5.02□□□□□ -1.61
COL1A1P02452 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL1A1P02452 AC083843.2-201ENST00000568248 6253 ntBASIC5.02□□□□□ -1.61
COL1A1P02452 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
COL1A1P02452 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.02□□□□□ -1.61
COL1A1P02452 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.02□□□□□ -1.61
COL1A1P02452 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL1A1P02452 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL1A1P02452 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
COL1A1P02452 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.02□□□□□ -1.61
COL1A1P02452 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL1A1P02452 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
COL1A1P02452 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.02□□□□□ -1.61
COL1A1P02452 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.02□□□□□ -1.61
COL1A1P02452 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.02□□□□□ -1.61
COL1A1P02452 AC126323.6-202ENST00000568092 3511 ntBASIC5.02□□□□□ -1.61
COL1A1P02452 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL1A1P02452 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.01□□□□□ -1.61
COL1A1P02452 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.01□□□□□ -1.61
COL1A1P02452 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL1A1P02452 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.01□□□□□ -1.61
COL1A1P02452 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.01□□□□□ -1.61
COL1A1P02452 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.01□□□□□ -1.61
COL1A1P02452 TCEA1P4-201ENST00000415066 844 ntBASIC5.01□□□□□ -1.61
COL1A1P02452 RPL37P1-201ENST00000432310 284 ntBASIC5.01□□□□□ -1.61
COL1A1P02452 ARL4AP3-201ENST00000441452 574 ntBASIC5.01□□□□□ -1.61
COL1A1P02452 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.01□□□□□ -1.61
COL1A1P02452 AC108022.1-201ENST00000493466 478 ntBASIC5.01□□□□□ -1.61
COL1A1P02452 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.01□□□□□ -1.61
COL1A1P02452 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.01□□□□□ -1.61
COL1A1P02452 SLC25A36P1-201ENST00000590111 465 ntBASIC5.01□□□□□ -1.61
COL1A1P02452 BNIP3P19-201ENST00000605397 577 ntBASIC5.01□□□□□ -1.61
COL1A1P02452 AC064801.1-201ENST00000612025 407 ntBASIC5.01□□□□□ -1.61
COL1A1P02452 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL1A1P02452 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL1A1P02452 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
COL1A1P02452 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms