Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN9O95484 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN9O95484 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.3□□□□□ -1.72
CLDN9O95484 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN9O95484 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
CLDN9O95484 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN9O95484 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN9O95484 AC104785.1-201ENST00000603220 588 ntBASIC4.3□□□□□ -1.72
CLDN9O95484 Z98200.1-201ENST00000607298 470 ntBASIC4.3□□□□□ -1.72
CLDN9O95484 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN9O95484 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN9O95484 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CLDN9O95484 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN9O95484 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN9O95484 AP000756.2-201ENST00000624168 2567 ntBASIC4.3□□□□□ -1.72
CLDN9O95484 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN9O95484 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN9O95484 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN9O95484 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
CLDN9O95484 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN9O95484 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN9O95484 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN9O95484 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.29□□□□□ -1.72
CLDN9O95484 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CLDN9O95484 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.29□□□□□ -1.72
CLDN9O95484 AC017104.4-201ENST00000636283 1592 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 MIR421-201ENST00000365696 85 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CLDN9O95484 SNORA56-201ENST00000383966 129 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 AL512430.2-201ENST00000406786 339 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 RPS20P14-201ENST00000412545 360 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN9O95484 RPL6P29-201ENST00000414863 865 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.29□□□□□ -1.72
CLDN9O95484 AL356806.1-201ENST00000422524 916 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN9O95484 AC073335.1-201ENST00000427776 363 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.29□□□□□ -1.72
CLDN9O95484 SKP1P3-201ENST00000429280 487 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 USP9YP9-201ENST00000429406 715 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN9O95484 ELOCP10-201ENST00000440624 327 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.29□□□□□ -1.72
CLDN9O95484 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN9O95484 AC113430.1-201ENST00000506872 718 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN9O95484 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN9O95484 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CLDN9O95484 ACTR6P1-201ENST00000514311 1104 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 AF186190.1-201ENST00000517470 480 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN9O95484 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 AP000827.1-201ENST00000527814 258 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN9O95484 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN9O95484 RPL23AP97-201ENST00000568955 471 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 AC069061.3-201ENST00000582254 823 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.29□□□□□ -1.72
CLDN9O95484 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN9O95484 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.29□□□□□ -1.72
CLDN9O95484 ELOCP34-201ENST00000604436 327 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 AC020634.1-201ENST00000608701 549 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 MIR6820-201ENST00000611508 62 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.29□□□□□ -1.72
CLDN9O95484 AL731566.2-201ENST00000618971 317 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CLDN9O95484 OR5AC4P-202ENST00000642086 985 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CLDN9O95484 MTCO1P8-201ENST00000416914 1523 ntBASIC4.29□□□□□ -1.72
CLDN9O95484 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN9O95484 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.29□□□□□ -1.72
CLDN9O95484 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.29□□□□□ -1.72
CLDN9O95484 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN9O95484 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN9O95484 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN9O95484 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN9O95484 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN9O95484 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.29□□□□□ -1.72
CLDN9O95484 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.29□□□□□ -1.72
CLDN9O95484 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CLDN9O95484 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN9O95484 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CLDN9O95484 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN9O95484 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN9O95484 AC067945.1-201ENST00000342609 618 ntBASIC4.28□□□□□ -1.72
CLDN9O95484 SNORA70F-201ENST00000384142 135 ntBASIC4.28□□□□□ -1.72
CLDN9O95484 RNU6-532P-201ENST00000384318 107 ntBASIC4.28□□□□□ -1.72
CLDN9O95484 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CLDN9O95484 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN9O95484 VN1R8P-201ENST00000407739 893 ntBASIC4.28□□□□□ -1.72
CLDN9O95484 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.28□□□□□ -1.72
CLDN9O95484 RPL26P37-201ENST00000411983 438 ntBASIC4.28□□□□□ -1.72
CLDN9O95484 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.28□□□□□ -1.72
CLDN9O95484 RPL26P29-201ENST00000415623 438 ntBASIC4.28□□□□□ -1.72
CLDN9O95484 AC048351.1-201ENST00000420064 602 ntBASIC4.28□□□□□ -1.72
CLDN9O95484 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.28□□□□□ -1.72
CLDN9O95484 RFESDP1-201ENST00000422350 461 ntBASIC4.28□□□□□ -1.72
CLDN9O95484 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.28□□□□□ -1.72
CLDN9O95484 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms