Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RAPGEF3O95398 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RAPGEF3O95398 SOCS5P3-201ENST00000425115 1576 ntBASIC7.05□□□□□ -1.28
RAPGEF3O95398 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 RNU6-31P-201ENST00000384388 108 ntBASIC7.05□□□□□ -1.28
RAPGEF3O95398 MTND4LP17-201ENST00000414607 293 ntBASIC7.05□□□□□ -1.28
RAPGEF3O95398 AC008173.1-201ENST00000418901 264 ntBASIC7.05□□□□□ -1.28
RAPGEF3O95398 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 TEX41-206ENST00000432608 661 ntTSL 3 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 AL353898.1-201ENST00000444055 238 ntBASIC7.05□□□□□ -1.28
RAPGEF3O95398 MTATP6P26-201ENST00000445926 662 ntBASIC7.05□□□□□ -1.28
RAPGEF3O95398 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RAPGEF3O95398 AC093534.1-201ENST00000504977 132 ntBASIC7.05□□□□□ -1.28
RAPGEF3O95398 AC020699.1-201ENST00000505161 445 ntBASIC7.05□□□□□ -1.28
RAPGEF3O95398 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 AC133963.2-201ENST00000513686 578 ntBASIC7.05□□□□□ -1.28
RAPGEF3O95398 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 AC022022.2-201ENST00000602989 360 ntBASIC7.05□□□□□ -1.28
RAPGEF3O95398 RNU6-84P-201ENST00000607737 102 ntBASIC7.05□□□□□ -1.28
RAPGEF3O95398 AC009159.2-201ENST00000617603 606 ntBASIC7.05□□□□□ -1.28
RAPGEF3O95398 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RAPGEF3O95398 NCOA4P2-201ENST00000340589 1813 ntBASIC7.05□□□□□ -1.28
RAPGEF3O95398 AC034229.2-201ENST00000566945 2508 ntBASIC7.05□□□□□ -1.28
RAPGEF3O95398 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RAPGEF3O95398 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RAPGEF3O95398 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RAPGEF3O95398 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 AC090017.1-201ENST00000548612 1779 ntBASIC7.05□□□□□ -1.28
RAPGEF3O95398 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RAPGEF3O95398 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC7.04□□□□□ -1.28
RAPGEF3O95398 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
RAPGEF3O95398 AL138820.1-201ENST00000617901 5305 ntBASIC7.04□□□□□ -1.28
RAPGEF3O95398 HSPD1P11-201ENST00000508643 1702 ntBASIC7.04□□□□□ -1.28
RAPGEF3O95398 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
RAPGEF3O95398 UQCRC2P1-201ENST00000417777 1332 ntBASIC7.04□□□□□ -1.28
RAPGEF3O95398 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC7.04□□□□□ -1.28
RAPGEF3O95398 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC7.04□□□□□ -1.28
RAPGEF3O95398 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RAPGEF3O95398 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RAPGEF3O95398 ZNF29P-201ENST00000225587 168 ntBASIC7.04□□□□□ -1.28
RAPGEF3O95398 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RAPGEF3O95398 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RAPGEF3O95398 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RAPGEF3O95398 RNU4-64P-201ENST00000410795 131 ntBASIC7.04□□□□□ -1.28
RAPGEF3O95398 CYCSP19-201ENST00000411715 316 ntBASIC7.04□□□□□ -1.28
RAPGEF3O95398 VPS26BP1-201ENST00000417155 755 ntBASIC7.04□□□□□ -1.28
RAPGEF3O95398 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RAPGEF3O95398 MTND1P31-201ENST00000449206 961 ntBASIC7.04□□□□□ -1.28
RAPGEF3O95398 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RAPGEF3O95398 AC104763.1-201ENST00000475274 360 ntBASIC7.04□□□□□ -1.28
RAPGEF3O95398 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC7.04□□□□□ -1.28
RAPGEF3O95398 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC7.04□□□□□ -1.28
RAPGEF3O95398 BOLA3P3-201ENST00000505182 232 ntBASIC7.04□□□□□ -1.28
RAPGEF3O95398 AC021193.1-201ENST00000511607 420 ntBASIC7.04□□□□□ -1.28
RAPGEF3O95398 RNU6-709P-201ENST00000517257 104 ntBASIC7.04□□□□□ -1.28
RAPGEF3O95398 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC7.04□□□□□ -1.28
RAPGEF3O95398 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC7.04□□□□□ -1.28
RAPGEF3O95398 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC7.04□□□□□ -1.28
RAPGEF3O95398 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC7.04□□□□□ -1.28
RAPGEF3O95398 MIR4433B-201ENST00000581329 102 ntBASIC7.04□□□□□ -1.28
RAPGEF3O95398 SNX6P1-201ENST00000601728 1224 ntBASIC7.04□□□□□ -1.28
RAPGEF3O95398 AC245100.7-201ENST00000609678 442 ntBASIC7.04□□□□□ -1.28
RAPGEF3O95398 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC7.04□□□□□ -1.28
RAPGEF3O95398 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC7.04□□□□□ -1.28
RAPGEF3O95398 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC7.04□□□□□ -1.28
RAPGEF3O95398 AC006963.1-201ENST00000624003 1052 ntBASIC7.04□□□□□ -1.28
RAPGEF3O95398 AC092159.4-201ENST00000624944 550 ntBASIC7.04□□□□□ -1.28
RAPGEF3O95398 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC7.04□□□□□ -1.28
RAPGEF3O95398 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC7.04□□□□□ -1.28
RAPGEF3O95398 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RAPGEF3O95398 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC7.04□□□□□ -1.28
RAPGEF3O95398 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
RAPGEF3O95398 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RAPGEF3O95398 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RAPGEF3O95398 PCF11-AS1-201ENST00000602322 1516 ntBASIC7.03□□□□□ -1.28
RAPGEF3O95398 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC7.03□□□□□ -1.28
RAPGEF3O95398 MGP-201ENST00000228938 694 ntTSL 3 BASIC7.03□□□□□ -1.28
RAPGEF3O95398 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RAPGEF3O95398 RNU6-628P-201ENST00000410675 107 ntBASIC7.03□□□□□ -1.28
RAPGEF3O95398 MED6P1-201ENST00000439659 713 ntBASIC7.03□□□□□ -1.28
RAPGEF3O95398 MTCO1P53-201ENST00000441633 699 ntBASIC7.03□□□□□ -1.28
RAPGEF3O95398 AL358794.1-201ENST00000445689 381 ntBASIC7.03□□□□□ -1.28
RAPGEF3O95398 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC7.03□□□□□ -1.28
RAPGEF3O95398 AC020890.1-201ENST00000491837 504 ntBASIC7.03□□□□□ -1.28
RAPGEF3O95398 SUMO2P4-201ENST00000504193 276 ntBASIC7.03□□□□□ -1.28
RAPGEF3O95398 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC7.03□□□□□ -1.28
RAPGEF3O95398 RFESD-208ENST00000513950 464 ntTSL 5 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms