Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RPL21P23-201ENST00000446654 460 ntBASIC1.83□□□□□ -2.12
USH2AO75445 MTND6P32-201ENST00000457611 483 ntBASIC1.83□□□□□ -2.12
USH2AO75445 AC010374.1-201ENST00000503762 1237 ntBASIC1.83□□□□□ -2.12
USH2AO75445 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC1.83□□□□□ -2.12
USH2AO75445 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC1.83□□□□□ -2.12
USH2AO75445 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC1.83□□□□□ -2.12
USH2AO75445 OR8I1P-201ENST00000529291 931 ntBASIC1.83□□□□□ -2.12
USH2AO75445 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC1.83□□□□□ -2.12
USH2AO75445 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 AL137849.1-201ENST00000604767 169 ntBASIC1.83□□□□□ -2.12
USH2AO75445 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC1.83□□□□□ -2.12
USH2AO75445 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
USH2AO75445 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC1.83□□□□□ -2.12
USH2AO75445 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC1.83□□□□□ -2.12
USH2AO75445 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
USH2AO75445 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC1.83□□□□□ -2.12
USH2AO75445 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 SNORA60-201ENST00000362396 134 ntBASIC1.83□□□□□ -2.12
USH2AO75445 RPL5P18-201ENST00000406671 891 ntBASIC1.83□□□□□ -2.12
USH2AO75445 AL513477.1-202ENST00000417061 214 ntBASIC1.83□□□□□ -2.12
USH2AO75445 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC1.83□□□□□ -2.12
USH2AO75445 CEACAMP1-201ENST00000434624 1035 ntBASIC1.83□□□□□ -2.12
USH2AO75445 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC1.83□□□□□ -2.12
USH2AO75445 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC1.83□□□□□ -2.12
USH2AO75445 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 AC110743.1-201ENST00000584870 478 ntBASIC1.83□□□□□ -2.12
USH2AO75445 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC1.83□□□□□ -2.12
USH2AO75445 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
USH2AO75445 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.82□□□□□ -2.12
USH2AO75445 AC068870.3-201ENST00000625077 2536 ntBASIC1.82□□□□□ -2.12
USH2AO75445 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
USH2AO75445 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
USH2AO75445 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
USH2AO75445 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
USH2AO75445 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC1.82□□□□□ -2.12
USH2AO75445 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
USH2AO75445 RNU1-63P-201ENST00000383902 164 ntBASIC1.82□□□□□ -2.12
USH2AO75445 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC1.82□□□□□ -2.12
USH2AO75445 RPL35AP15-201ENST00000468042 339 ntBASIC1.82□□□□□ -2.12
USH2AO75445 RPS29P19-201ENST00000479709 171 ntBASIC1.82□□□□□ -2.12
USH2AO75445 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC1.82□□□□□ -2.12
USH2AO75445 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
USH2AO75445 AC010201.1-201ENST00000605051 540 ntBASIC1.82□□□□□ -2.12
USH2AO75445 AP005435.3-201ENST00000531260 3198 ntBASIC1.82□□□□□ -2.12
USH2AO75445 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
USH2AO75445 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
USH2AO75445 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC1.82□□□□□ -2.12
USH2AO75445 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
USH2AO75445 AC116667.1-201ENST00000604855 2072 ntBASIC1.82□□□□□ -2.12
USH2AO75445 HSPA8P17-201ENST00000427029 1382 ntBASIC1.82□□□□□ -2.12
USH2AO75445 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
USH2AO75445 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
USH2AO75445 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
USH2AO75445 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
USH2AO75445 SNORA38.1-201ENST00000364172 131 ntBASIC1.82□□□□□ -2.12
USH2AO75445 GSTA8P-201ENST00000404253 637 ntBASIC1.82□□□□□ -2.12
USH2AO75445 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC1.82□□□□□ -2.12
USH2AO75445 AC003685.2-201ENST00000422795 395 ntBASIC1.82□□□□□ -2.12
USH2AO75445 AC018635.1-201ENST00000468292 1030 ntBASIC1.82□□□□□ -2.12
USH2AO75445 KC877373.1-201ENST00000479066 408 ntBASIC1.82□□□□□ -2.12
USH2AO75445 UBE2CP3-201ENST00000502715 450 ntBASIC1.82□□□□□ -2.12
USH2AO75445 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
USH2AO75445 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC1.82□□□□□ -2.12
USH2AO75445 OR8Q1P-201ENST00000526467 655 ntBASIC1.82□□□□□ -2.12
USH2AO75445 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC1.82□□□□□ -2.12
USH2AO75445 AC139426.3-201ENST00000605648 2059 ntBASIC1.82□□□□□ -2.12
USH2AO75445 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
USH2AO75445 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
USH2AO75445 CALN1-202ENST00000395275 9459 ntAPPRIS ALT1 TSL 5 BASIC1.82□□□□□ -2.12
USH2AO75445 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC1.82□□□□□ -2.12
USH2AO75445 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
USH2AO75445 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
USH2AO75445 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC1.82□□□□□ -2.12
USH2AO75445 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
USH2AO75445 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
USH2AO75445 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC1.82□□□□□ -2.12
USH2AO75445 RPL7P58-201ENST00000402913 758 ntBASIC1.82□□□□□ -2.12
USH2AO75445 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC1.82□□□□□ -2.12
USH2AO75445 AC073063.1-201ENST00000434352 607 ntBASIC1.82□□□□□ -2.12
USH2AO75445 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC1.82□□□□□ -2.12
USH2AO75445 AC012671.1-201ENST00000451912 203 ntBASIC1.82□□□□□ -2.12
USH2AO75445 AC138409.2-202ENST00000507274 458 ntBASIC1.82□□□□□ -2.12
USH2AO75445 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC1.82□□□□□ -2.12
USH2AO75445 AC079587.1-201ENST00000603846 277 ntBASIC1.82□□□□□ -2.12
USH2AO75445 AL049634.3-201ENST00000604968 457 ntBASIC1.82□□□□□ -2.12
USH2AO75445 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC1.82□□□□□ -2.12
USH2AO75445 AC023509.5-201ENST00000617434 807 ntBASIC1.82□□□□□ -2.12
USH2AO75445 ZNF90P1-201ENST00000480493 1951 ntBASIC1.82□□□□□ -2.12
USH2AO75445 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
USH2AO75445 AL136164.3-201ENST00000624429 3978 ntBASIC1.82□□□□□ -2.12
USH2AO75445 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms