Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL050305.1-201ENST00000399993 1230 ntBASIC3.34□□□□□ -1.87
SSSCA1O60232 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC3.34□□□□□ -1.87
SSSCA1O60232 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC3.34□□□□□ -1.87
SSSCA1O60232 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.34□□□□□ -1.87
SSSCA1O60232 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.34□□□□□ -1.87
SSSCA1O60232 RPL23AP52-201ENST00000439311 478 ntBASIC3.34□□□□□ -1.87
SSSCA1O60232 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.34□□□□□ -1.87
SSSCA1O60232 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.34□□□□□ -1.87
SSSCA1O60232 EEF1A1P1-201ENST00000447052 739 ntBASIC3.34□□□□□ -1.87
SSSCA1O60232 RPL7AP6-201ENST00000477943 801 ntBASIC3.34□□□□□ -1.87
SSSCA1O60232 STRADBP1-201ENST00000478954 1281 ntBASIC3.34□□□□□ -1.87
SSSCA1O60232 RN7SL727P-201ENST00000482164 296 ntBASIC3.34□□□□□ -1.87
SSSCA1O60232 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
SSSCA1O60232 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.34□□□□□ -1.87
SSSCA1O60232 AC018797.3-201ENST00000513388 1241 ntBASIC3.34□□□□□ -1.87
SSSCA1O60232 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SSSCA1O60232 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.34□□□□□ -1.87
SSSCA1O60232 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.34□□□□□ -1.87
SSSCA1O60232 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.34□□□□□ -1.87
SSSCA1O60232 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SSSCA1O60232 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.34□□□□□ -1.87
SSSCA1O60232 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.34□□□□□ -1.87
SSSCA1O60232 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.34□□□□□ -1.87
SSSCA1O60232 RPL23AP87-202ENST00000573039 466 ntBASIC3.34□□□□□ -1.87
SSSCA1O60232 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.34□□□□□ -1.87
SSSCA1O60232 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.34□□□□□ -1.87
SSSCA1O60232 AC015911.5-201ENST00000587076 451 ntBASIC3.34□□□□□ -1.87
SSSCA1O60232 MRPS35P3-201ENST00000603189 709 ntBASIC3.34□□□□□ -1.87
SSSCA1O60232 AC022467.1-201ENST00000614738 749 ntBASIC3.34□□□□□ -1.87
SSSCA1O60232 AC090246.1-201ENST00000616499 426 ntBASIC3.34□□□□□ -1.87
SSSCA1O60232 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.34□□□□□ -1.87
SSSCA1O60232 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SSSCA1O60232 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SSSCA1O60232 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
SSSCA1O60232 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.34□□□□□ -1.88
SSSCA1O60232 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.34□□□□□ -1.88
SSSCA1O60232 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
SSSCA1O60232 AP001486.2-201ENST00000561652 5113 ntBASIC3.34□□□□□ -1.88
SSSCA1O60232 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.34□□□□□ -1.88
SSSCA1O60232 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSSCA1O60232 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSSCA1O60232 AC006504.1-201ENST00000562493 3666 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SSSCA1O60232 OR5P1P-201ENST00000299512 925 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.33□□□□□ -1.88
SSSCA1O60232 AL049697.2-201ENST00000403708 294 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.33□□□□□ -1.88
SSSCA1O60232 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SSSCA1O60232 TMSB10P2-201ENST00000416049 131 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.33□□□□□ -1.88
SSSCA1O60232 UQCRBP1-201ENST00000421129 336 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.33□□□□□ -1.88
SSSCA1O60232 RPS6P12-201ENST00000432491 726 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 RPL7P28-201ENST00000437739 740 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 RPL23AP46-201ENST00000438548 490 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 AL512326.1-201ENST00000443050 721 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 CEACAMP6-201ENST00000452007 574 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.33□□□□□ -1.88
SSSCA1O60232 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.33□□□□□ -1.88
SSSCA1O60232 AC004815.1-201ENST00000484185 331 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 AC026726.1-201ENST00000512859 601 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.33□□□□□ -1.88
SSSCA1O60232 AC092851.1-201ENST00000535964 478 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.33□□□□□ -1.88
SSSCA1O60232 MIR3934-201ENST00000579806 107 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 MIR4737-201ENST00000583979 81 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 QTRT1P1-201ENST00000604344 1078 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 AC100847.1-201ENST00000611316 481 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 uc_338.13-201ENST00000618243 179 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 AL445363.3-201ENST00000623080 671 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 AC140479.6-201ENST00000633535 357 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSSCA1O60232 IPO8P1-201ENST00000455509 3109 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SSSCA1O60232 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSSCA1O60232 MTND5P23-201ENST00000430812 1655 ntBASIC3.33□□□□□ -1.88
SSSCA1O60232 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.33□□□□□ -1.88
SSSCA1O60232 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.33□□□□□ -1.88
SSSCA1O60232 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSSCA1O60232 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.33□□□□□ -1.88
SSSCA1O60232 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.32□□□□□ -1.88
SSSCA1O60232 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SSSCA1O60232 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SSSCA1O60232 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
SSSCA1O60232 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SSSCA1O60232 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SSSCA1O60232 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.32□□□□□ -1.88
SSSCA1O60232 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SSSCA1O60232 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SSSCA1O60232 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
SSSCA1O60232 RNA5SP36-201ENST00000410197 133 ntBASIC3.32□□□□□ -1.88
SSSCA1O60232 AC079355.1-201ENST00000421770 223 ntBASIC3.32□□□□□ -1.88
SSSCA1O60232 AC011998.1-201ENST00000433403 117 ntBASIC3.32□□□□□ -1.88
SSSCA1O60232 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.32□□□□□ -1.88
SSSCA1O60232 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.32□□□□□ -1.88
SSSCA1O60232 SERPINA7P1-201ENST00000443077 631 ntBASIC3.32□□□□□ -1.88
SSSCA1O60232 AC239798.3-201ENST00000454459 408 ntBASIC3.32□□□□□ -1.88
SSSCA1O60232 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.32□□□□□ -1.88
SSSCA1O60232 AF213884.1-201ENST00000488102 463 ntBASIC3.32□□□□□ -1.88
SSSCA1O60232 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms