Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 TDGF1P1-201ENST00000445734 527 ntBASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 AC012671.1-201ENST00000451912 203 ntBASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 BTG4P1-201ENST00000510421 183 ntBASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 FABP5P6-201ENST00000510588 409 ntBASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 RNA5SP303-201ENST00000516192 130 ntBASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 AC020923.1-201ENST00000624021 917 ntBASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 AP003499.2-201ENST00000624100 483 ntBASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 AC019080.5-201ENST00000624891 757 ntBASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 MFSD8-220ENST00000641243 1422 ntBASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 LINC00622-201ENST00000562811 1570 ntBASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NEDD8-MDP1E9PL57 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 CCNB2P1-201ENST00000399411 1150 ntBASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AL592291.1-201ENST00000403830 352 ntBASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AL356967.1-201ENST00000406305 431 ntBASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AL358176.3-201ENST00000420757 454 ntBASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 RAD23BP1-201ENST00000421404 1227 ntBASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 SALL4P2-201ENST00000423288 2910 ntBASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AC007563.3-201ENST00000433233 371 ntBASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 ARAFP2-201ENST00000440565 559 ntBASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 VN1R48P-201ENST00000448149 1036 ntBASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 RNU6-889P-201ENST00000517189 103 ntBASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 OR4V1P-201ENST00000525394 1140 ntBASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 MIR3138-201ENST00000585238 82 ntBASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AC011477.5-201ENST00000586571 259 ntBASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AC005332.5-201ENST00000591222 2919 ntBASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 IPO5P1-202ENST00000600039 287 ntBASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AC020910.2-201ENST00000603635 610 ntBASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AC005021.1-201ENST00000608730 355 ntBASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AC006213.5-201ENST00000619673 288 ntBASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 AC087190.4-201ENST00000574616 8334 ntBASIC4.59□□□□□ -1.67
NEDD8-MDP1E9PL57 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
NEDD8-MDP1E9PL57 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.59□□□□□ -1.68
NEDD8-MDP1E9PL57 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
NEDD8-MDP1E9PL57 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
NEDD8-MDP1E9PL57 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
NEDD8-MDP1E9PL57 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
NEDD8-MDP1E9PL57 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
NEDD8-MDP1E9PL57 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
NEDD8-MDP1E9PL57 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 216.8 ms