Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 RNA5SP187-201ENST00000384400 119 ntBASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 MIR525-201ENST00000384978 85 ntBASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 MIR105-1-201ENST00000385222 81 ntBASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AC092745.2-202ENST00000411880 369 ntBASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 HSFY4P-201ENST00000415994 1181 ntBASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 MTND1P32-201ENST00000433043 938 ntBASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 SBDSP1-204ENST00000453858 737 ntBASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 RPL7P6-201ENST00000480903 738 ntBASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AC012123.2-201ENST00000485809 248 ntBASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 OR5H4P-201ENST00000510851 923 ntBASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AC040958.1-201ENST00000561102 201 ntBASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AC016839.1-201ENST00000578162 867 ntBASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AC008814.1-201ENST00000603797 406 ntBASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 LSM1P2-201ENST00000604911 322 ntBASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AC099676.1-201ENST00000608886 657 ntBASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AL592148.2-201ENST00000612210 372 ntBASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AL356274.1-201ENST00000617064 410 ntBASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 AC098679.4-201ENST00000624241 654 ntBASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 U6.107-201ENST00000637108 79 ntBASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.15□□□□□ -1.42
PTPDC1A2A3K4 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
PTPDC1A2A3K4 AL445523.1-201ENST00000451184 1362 ntBASIC6.15□□□□□ -1.43
PTPDC1A2A3K4 AC092376.2-201ENST00000622621 4116 ntBASIC6.15□□□□□ -1.43
PTPDC1A2A3K4 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PTPDC1A2A3K4 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.15□□□□□ -1.43
PTPDC1A2A3K4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PTPDC1A2A3K4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PTPDC1A2A3K4 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 RNU1-106P-201ENST00000384382 164 ntBASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 MIR937-201ENST00000401271 86 ntBASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 REREP1Y-201ENST00000422655 198 ntBASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 CNOT7P1-201ENST00000429006 852 ntBASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 AC234064.1-201ENST00000436312 247 ntBASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 RPL7P29-201ENST00000437151 728 ntBASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 CACYBPP1-201ENST00000438592 684 ntBASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 REREP2Y-201ENST00000439103 200 ntBASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 MTND5P2-201ENST00000442927 1142 ntBASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 AL929288.2-201ENST00000446368 407 ntBASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 GAPDHP14-201ENST00000450472 937 ntBASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 AC011979.1-201ENST00000472300 483 ntBASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 RAP1BP2-201ENST00000478270 544 ntBASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 RPL7P40-201ENST00000481703 745 ntBASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 AC111193.1-201ENST00000504097 155 ntBASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 SNRPCP2-201ENST00000504370 475 ntBASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 Y_RNA.655-201ENST00000515919 96 ntBASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 AC008083.2-201ENST00000546707 476 ntBASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 LYZ-203ENST00000549690 669 ntTSL 2 BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.14□□□□□ -1.43
PTPDC1A2A3K4 AC022884.2-201ENST00000578535 580 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms