Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
DDX49Q9Y6V7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 AC087633.2-202ENST00000565166 1439 ntBASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 AC008550.1-201ENST00000511500 884 ntBASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 AC069544.1-201ENST00000609399 999 ntBASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.26■■□□□ 1.31
DDX49Q9Y6V7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
DDX49Q9Y6V7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX49Q9Y6V7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
DDX49Q9Y6V7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX49Q9Y6V7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX49Q9Y6V7 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.25■■□□□ 1.31
DDX49Q9Y6V7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX49Q9Y6V7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX49Q9Y6V7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX49Q9Y6V7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.25■■□□□ 1.31
DDX49Q9Y6V7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
DDX49Q9Y6V7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.25■■□□□ 1.31
DDX49Q9Y6V7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
DDX49Q9Y6V7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX49Q9Y6V7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
DDX49Q9Y6V7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX49Q9Y6V7 Z82202.1-201ENST00000623446 1880 ntBASIC23.25■■□□□ 1.31
DDX49Q9Y6V7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX49Q9Y6V7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX49Q9Y6V7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX49Q9Y6V7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
DDX49Q9Y6V7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX49Q9Y6V7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX49Q9Y6V7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX49Q9Y6V7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
DDX49Q9Y6V7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX49Q9Y6V7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX49Q9Y6V7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
DDX49Q9Y6V7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.24■■□□□ 1.31
DDX49Q9Y6V7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
DDX49Q9Y6V7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.24■■□□□ 1.31
DDX49Q9Y6V7 RN7SL471P-201ENST00000580476 299 ntBASIC23.24■■□□□ 1.31
DDX49Q9Y6V7 AC006557.6-201ENST00000623071 864 ntBASIC23.24■■□□□ 1.31
DDX49Q9Y6V7 DPP3P2-201ENST00000416030 1696 ntBASIC23.24■■□□□ 1.31
DDX49Q9Y6V7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
DDX49Q9Y6V7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX49Q9Y6V7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX49Q9Y6V7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX49Q9Y6V7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
DDX49Q9Y6V7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
DDX49Q9Y6V7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
DDX49Q9Y6V7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DDX49Q9Y6V7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX49Q9Y6V7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DDX49Q9Y6V7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.23■■□□□ 1.31
DDX49Q9Y6V7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.23■■□□□ 1.31
DDX49Q9Y6V7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.23■■□□□ 1.31
DDX49Q9Y6V7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DDX49Q9Y6V7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC23.23■■□□□ 1.31
DDX49Q9Y6V7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX49Q9Y6V7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX49Q9Y6V7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX49Q9Y6V7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX49Q9Y6V7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX49Q9Y6V7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX49Q9Y6V7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX49Q9Y6V7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC23.22■■□□□ 1.31
DDX49Q9Y6V7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX49Q9Y6V7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
DDX49Q9Y6V7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.22■■□□□ 1.31
DDX49Q9Y6V7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX49Q9Y6V7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC23.22■■□□□ 1.31
DDX49Q9Y6V7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
DDX49Q9Y6V7 AC026471.1-201ENST00000564629 3026 ntBASIC23.22■■□□□ 1.31
DDX49Q9Y6V7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.22■■□□□ 1.31
DDX49Q9Y6V7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.22■■□□□ 1.31
DDX49Q9Y6V7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.22■■□□□ 1.31
DDX49Q9Y6V7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.22■■□□□ 1.31
DDX49Q9Y6V7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.22■■□□□ 1.31
DDX49Q9Y6V7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
DDX49Q9Y6V7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms