Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 AL121829.2-201ENST00000620908 328 ntBASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 AL353708.3-201ENST00000610272 989 ntBASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 AC026471.5-201ENST00000615068 467 ntBASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB1Q9Y5F3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 AL445228.2-201ENST00000605589 952 ntBASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
PCDHB1Q9Y5F3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 AP003071.4-201ENST00000562276 1284 ntBASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 RN7SL850P-201ENST00000579959 291 ntBASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHB1Q9Y5F3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms