Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIX4Q9UIU6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
SIX4Q9UIU6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 AC008040.2-201ENST00000461049 708 ntBASIC20.81■□□□□ 0.92
SIX4Q9UIU6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 Z82202.1-201ENST00000623446 1880 ntBASIC20.81■□□□□ 0.92
SIX4Q9UIU6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SIX4Q9UIU6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 RCC2P6-201ENST00000526625 1557 ntBASIC20.8■□□□□ 0.92
SIX4Q9UIU6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 KRT17P2-201ENST00000300992 1314 ntBASIC20.8■□□□□ 0.92
SIX4Q9UIU6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 B3GAT3P1-201ENST00000471720 806 ntBASIC20.8■□□□□ 0.92
SIX4Q9UIU6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 SDHAP1-207ENST00000440850 2000 ntBASIC20.8■□□□□ 0.92
SIX4Q9UIU6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
SIX4Q9UIU6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SIX4Q9UIU6 KRT8P41-201ENST00000533985 1514 ntBASIC20.79■□□□□ 0.92
SIX4Q9UIU6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIX4Q9UIU6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
SIX4Q9UIU6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SIX4Q9UIU6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.79■□□□□ 0.92
SIX4Q9UIU6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIX4Q9UIU6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SIX4Q9UIU6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.79■□□□□ 0.92
SIX4Q9UIU6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SIX4Q9UIU6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.79■□□□□ 0.92
SIX4Q9UIU6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.79■□□□□ 0.92
SIX4Q9UIU6 MIR6786-201ENST00000616843 113 ntBASIC20.79■□□□□ 0.92
SIX4Q9UIU6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.79■□□□□ 0.92
SIX4Q9UIU6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIX4Q9UIU6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.78■□□□□ 0.92
SIX4Q9UIU6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SIX4Q9UIU6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SIX4Q9UIU6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SIX4Q9UIU6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms