Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 NIFKP9-201ENST00000419265 221 ntBASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 TCF3P1-201ENST00000423021 1937 ntBASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FNDC9Q8TBE3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 AC009237.14-201ENST00000609975 1594 ntBASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FNDC9Q8TBE3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 PCDHAC2-203ENST00000615316 3011 ntBASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 KSR1P1-201ENST00000446298 240 ntBASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 AC026471.5-201ENST00000615068 467 ntBASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
FNDC9Q8TBE3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.46■□□□□ 0.38
FNDC9Q8TBE3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 AL355355.2-201ENST00000442321 338 ntBASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 CR392000.1-201ENST00000624770 1228 ntBASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.45■□□□□ 0.38
FNDC9Q8TBE3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms