Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC27.09■■□□□ 1.93
XRN1Q8IZH2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
XRN1Q8IZH2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC27.09■■□□□ 1.93
XRN1Q8IZH2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
XRN1Q8IZH2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
XRN1Q8IZH2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
XRN1Q8IZH2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC27.08■■□□□ 1.93
XRN1Q8IZH2 AP000347.1-202ENST00000435868 847 ntBASIC27.08■■□□□ 1.93
XRN1Q8IZH2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC27.08■■□□□ 1.93
XRN1Q8IZH2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC27.08■■□□□ 1.93
XRN1Q8IZH2 PRELID1P1-202ENST00000567272 903 ntBASIC27.08■■□□□ 1.93
XRN1Q8IZH2 CR769767.2-201ENST00000622735 460 ntBASIC27.08■■□□□ 1.93
XRN1Q8IZH2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
XRN1Q8IZH2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
XRN1Q8IZH2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC27.08■■□□□ 1.93
XRN1Q8IZH2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC27.07■■□□□ 1.92
XRN1Q8IZH2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC27.07■■□□□ 1.92
XRN1Q8IZH2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC27.07■■□□□ 1.92
XRN1Q8IZH2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC27.07■■□□□ 1.92
XRN1Q8IZH2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC27.07■■□□□ 1.92
XRN1Q8IZH2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
XRN1Q8IZH2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
XRN1Q8IZH2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
XRN1Q8IZH2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC27.07■■□□□ 1.92
XRN1Q8IZH2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC27.07■■□□□ 1.92
XRN1Q8IZH2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
XRN1Q8IZH2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
XRN1Q8IZH2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
XRN1Q8IZH2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
XRN1Q8IZH2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC27.06■■□□□ 1.92
XRN1Q8IZH2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC27.06■■□□□ 1.92
XRN1Q8IZH2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
XRN1Q8IZH2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
XRN1Q8IZH2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC27.06■■□□□ 1.92
XRN1Q8IZH2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC27.06■■□□□ 1.92
XRN1Q8IZH2 IFNL4P1-201ENST00000607083 540 ntBASIC27.06■■□□□ 1.92
XRN1Q8IZH2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
XRN1Q8IZH2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
XRN1Q8IZH2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
XRN1Q8IZH2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC27.06■■□□□ 1.92
XRN1Q8IZH2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
XRN1Q8IZH2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC27.05■■□□□ 1.92
XRN1Q8IZH2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
XRN1Q8IZH2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC27.05■■□□□ 1.92
XRN1Q8IZH2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
XRN1Q8IZH2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC27.05■■□□□ 1.92
XRN1Q8IZH2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
XRN1Q8IZH2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
XRN1Q8IZH2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC27.05■■□□□ 1.92
XRN1Q8IZH2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
XRN1Q8IZH2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC27.05■■□□□ 1.92
XRN1Q8IZH2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
XRN1Q8IZH2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC27.04■■□□□ 1.92
XRN1Q8IZH2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC27.04■■□□□ 1.92
XRN1Q8IZH2 KRT17P6-201ENST00000453795 1220 ntBASIC27.04■■□□□ 1.92
XRN1Q8IZH2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC27.04■■□□□ 1.92
XRN1Q8IZH2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC27.04■■□□□ 1.92
XRN1Q8IZH2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
XRN1Q8IZH2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
XRN1Q8IZH2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
XRN1Q8IZH2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
XRN1Q8IZH2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
XRN1Q8IZH2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
XRN1Q8IZH2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
XRN1Q8IZH2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
XRN1Q8IZH2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC27.04■■□□□ 1.92
XRN1Q8IZH2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC27.04■■□□□ 1.92
XRN1Q8IZH2 AC023511.2-201ENST00000618803 211 ntBASIC27.04■■□□□ 1.92
XRN1Q8IZH2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
XRN1Q8IZH2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC27.04■■□□□ 1.92
XRN1Q8IZH2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
XRN1Q8IZH2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC27.03■■□□□ 1.92
XRN1Q8IZH2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
XRN1Q8IZH2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC27.03■■□□□ 1.92
XRN1Q8IZH2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
XRN1Q8IZH2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
XRN1Q8IZH2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
XRN1Q8IZH2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC27.03■■□□□ 1.92
XRN1Q8IZH2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC27.03■■□□□ 1.92
XRN1Q8IZH2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC27.03■■□□□ 1.92
XRN1Q8IZH2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
XRN1Q8IZH2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
XRN1Q8IZH2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC27.03■■□□□ 1.92
XRN1Q8IZH2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC27.03■■□□□ 1.92
XRN1Q8IZH2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
XRN1Q8IZH2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
XRN1Q8IZH2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
XRN1Q8IZH2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
XRN1Q8IZH2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
XRN1Q8IZH2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
XRN1Q8IZH2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC27.02■■□□□ 1.92
XRN1Q8IZH2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
XRN1Q8IZH2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
XRN1Q8IZH2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC27.02■■□□□ 1.92
XRN1Q8IZH2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
XRN1Q8IZH2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
XRN1Q8IZH2 RASA4DP-201ENST00000460726 1199 ntBASIC27.02■■□□□ 1.92
XRN1Q8IZH2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
XRN1Q8IZH2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
XRN1Q8IZH2 MIR3652-201ENST00000579335 131 ntBASIC27.02■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms