Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Tpm1P58771 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpm1P58771 Gm18284-201ENSMUST00000172604 624 ntBASIC18.6■□□□□ 0.57
Tpm1P58771 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tpm1P58771 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpm1P58771 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Tpm1P58771 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.6■□□□□ 0.57
Tpm1P58771 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Tpm1P58771 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Tpm1P58771 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpm1P58771 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Tpm1P58771 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpm1P58771 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpm1P58771 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tpm1P58771 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tpm1P58771 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tpm1P58771 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.59■□□□□ 0.57
Tpm1P58771 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tpm1P58771 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tpm1P58771 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Tpm1P58771 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tpm1P58771 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tpm1P58771 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Tpm1P58771 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Tpm1P58771 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tpm1P58771 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.59■□□□□ 0.57
Tpm1P58771 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Tpm1P58771 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tpm1P58771 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Tpm1P58771 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tpm1P58771 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Tpm1P58771 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tpm1P58771 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tpm1P58771 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Tpm1P58771 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tpm1P58771 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
Tpm1P58771 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tpm1P58771 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tpm1P58771 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tpm1P58771 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Tpm1P58771 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tpm1P58771 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tpm1P58771 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tpm1P58771 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tpm1P58771 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Tpm1P58771 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.58■□□□□ 0.56
Tpm1P58771 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.58■□□□□ 0.56
Tpm1P58771 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Tpm1P58771 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.58■□□□□ 0.56
Tpm1P58771 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Tpm1P58771 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tpm1P58771 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tpm1P58771 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tpm1P58771 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.58■□□□□ 0.56
Tpm1P58771 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tpm1P58771 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tpm1P58771 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Tpm1P58771 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tpm1P58771 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpm1P58771 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Tpm1P58771 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Tpm1P58771 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpm1P58771 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpm1P58771 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpm1P58771 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpm1P58771 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Tpm1P58771 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.57■□□□□ 0.56
Tpm1P58771 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpm1P58771 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpm1P58771 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.57■□□□□ 0.56
Tpm1P58771 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpm1P58771 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tpm1P58771 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpm1P58771 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tpm1P58771 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpm1P58771 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Tpm1P58771 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tpm1P58771 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpm1P58771 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tpm1P58771 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpm1P58771 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tpm1P58771 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpm1P58771 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpm1P58771 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.56■□□□□ 0.56
Tpm1P58771 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tpm1P58771 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpm1P58771 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.56■□□□□ 0.56
Tpm1P58771 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.56■□□□□ 0.56
Tpm1P58771 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpm1P58771 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpm1P58771 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpm1P58771 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Tpm1P58771 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpm1P58771 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpm1P58771 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpm1P58771 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpm1P58771 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tpm1P58771 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpm1P58771 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tpm1P58771 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms