Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.87■■□□□ 1.41
COL11A2P13942 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC23.87■■□□□ 1.41
COL11A2P13942 RN7SL510P-201ENST00000581311 263 ntBASIC23.87■■□□□ 1.41
COL11A2P13942 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
COL11A2P13942 IFNL4P1-201ENST00000607083 540 ntBASIC23.87■■□□□ 1.41
COL11A2P13942 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL11A2P13942 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL11A2P13942 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL11A2P13942 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC23.87■■□□□ 1.41
COL11A2P13942 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
COL11A2P13942 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL11A2P13942 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL11A2P13942 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL11A2P13942 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC23.87■■□□□ 1.41
COL11A2P13942 MIR3180-1-201ENST00000580374 94 ntBASIC23.87■■□□□ 1.41
COL11A2P13942 MIR3180-3-201ENST00000584616 94 ntBASIC23.87■■□□□ 1.41
COL11A2P13942 AC092119.3-201ENST00000612618 583 ntBASIC23.87■■□□□ 1.41
COL11A2P13942 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL11A2P13942 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL11A2P13942 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC23.86■■□□□ 1.41
COL11A2P13942 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL11A2P13942 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC23.86■■□□□ 1.41
COL11A2P13942 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COL11A2P13942 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL11A2P13942 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL11A2P13942 PRELID1P1-202ENST00000567272 903 ntBASIC23.86■■□□□ 1.41
COL11A2P13942 AC111152.3-201ENST00000569699 673 ntBASIC23.86■■□□□ 1.41
COL11A2P13942 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
COL11A2P13942 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL11A2P13942 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC23.86■■□□□ 1.41
COL11A2P13942 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC23.86■■□□□ 1.41
COL11A2P13942 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL11A2P13942 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC23.86■■□□□ 1.41
COL11A2P13942 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL11A2P13942 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL11A2P13942 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
COL11A2P13942 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.86■■□□□ 1.41
COL11A2P13942 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL11A2P13942 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL11A2P13942 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL11A2P13942 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.85■■□□□ 1.41
COL11A2P13942 SDHD-206ENST00000528182 754 ntTSL 3 BASIC23.85■■□□□ 1.41
COL11A2P13942 CR769767.2-201ENST00000622735 460 ntBASIC23.85■■□□□ 1.41
COL11A2P13942 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC23.85■■□□□ 1.41
COL11A2P13942 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL11A2P13942 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
COL11A2P13942 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC23.85■■□□□ 1.41
COL11A2P13942 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC23.85■■□□□ 1.41
COL11A2P13942 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC23.85■■□□□ 1.41
COL11A2P13942 AC036111.1-201ENST00000533973 1582 ntBASIC23.85■■□□□ 1.41
COL11A2P13942 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL11A2P13942 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
COL11A2P13942 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL11A2P13942 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A2P13942 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A2P13942 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC23.84■■□□□ 1.41
COL11A2P13942 AP000347.1-202ENST00000435868 847 ntBASIC23.84■■□□□ 1.41
COL11A2P13942 FDX1P1-201ENST00000449115 551 ntBASIC23.84■■□□□ 1.41
COL11A2P13942 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A2P13942 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC23.84■■□□□ 1.41
COL11A2P13942 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC23.84■■□□□ 1.41
COL11A2P13942 AC140113.3-201ENST00000605663 199 ntBASIC23.84■■□□□ 1.41
COL11A2P13942 FGF14-AS2-201ENST00000606448 1074 ntBASIC23.84■■□□□ 1.41
COL11A2P13942 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
COL11A2P13942 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
COL11A2P13942 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.84■■□□□ 1.41
COL11A2P13942 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A2P13942 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A2P13942 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
COL11A2P13942 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A2P13942 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A2P13942 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A2P13942 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
COL11A2P13942 SKP2-204ENST00000508514 821 ntTSL 3 BASIC23.84■■□□□ 1.41
COL11A2P13942 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC23.84■■□□□ 1.41
COL11A2P13942 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC23.84■■□□□ 1.41
COL11A2P13942 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A2P13942 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC23.84■■□□□ 1.41
COL11A2P13942 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC23.84■■□□□ 1.41
COL11A2P13942 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A2P13942 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.84■■□□□ 1.41
COL11A2P13942 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A2P13942 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A2P13942 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL11A2P13942 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL11A2P13942 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL11A2P13942 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL11A2P13942 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL11A2P13942 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.83■■□□□ 1.41
COL11A2P13942 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC23.83■■□□□ 1.41
COL11A2P13942 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
COL11A2P13942 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC23.83■■□□□ 1.41
COL11A2P13942 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.83■■□□□ 1.41
COL11A2P13942 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
COL11A2P13942 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL11A2P13942 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL11A2P13942 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL11A2P13942 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
COL11A2P13942 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL11A2P13942 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms