Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
COL4A2P08572 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A2P08572 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A2P08572 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.66■□□□□ 0.74
COL4A2P08572 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A2P08572 CLDN5-201ENST00000403084 2357 ntBASIC19.66■□□□□ 0.74
COL4A2P08572 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A2P08572 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.66■□□□□ 0.74
COL4A2P08572 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.66■□□□□ 0.74
COL4A2P08572 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.66■□□□□ 0.74
COL4A2P08572 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A2P08572 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.66■□□□□ 0.74
COL4A2P08572 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.66■□□□□ 0.74
COL4A2P08572 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A2P08572 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A2P08572 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A2P08572 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COL4A2P08572 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
COL4A2P08572 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A2P08572 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A2P08572 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.66■□□□□ 0.74
COL4A2P08572 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.66■□□□□ 0.74
COL4A2P08572 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.66■□□□□ 0.74
COL4A2P08572 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A2P08572 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.66■□□□□ 0.74
COL4A2P08572 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A2P08572 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL4A2P08572 HBZP1-201ENST00000354915 429 ntBASIC19.65■□□□□ 0.74
COL4A2P08572 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.65■□□□□ 0.74
COL4A2P08572 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A2P08572 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.65■□□□□ 0.74
COL4A2P08572 AL136038.3-201ENST00000561909 1096 ntBASIC19.65■□□□□ 0.74
COL4A2P08572 MIR4674-201ENST00000582457 87 ntBASIC19.65■□□□□ 0.74
COL4A2P08572 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A2P08572 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
COL4A2P08572 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.65■□□□□ 0.74
COL4A2P08572 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A2P08572 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A2P08572 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A2P08572 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A2P08572 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.65■□□□□ 0.74
COL4A2P08572 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.65■□□□□ 0.74
COL4A2P08572 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A2P08572 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
COL4A2P08572 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A2P08572 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A2P08572 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
COL4A2P08572 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
COL4A2P08572 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A2P08572 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL4A2P08572 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
COL4A2P08572 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL4A2P08572 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL4A2P08572 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A2P08572 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.64■□□□□ 0.73
COL4A2P08572 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.64■□□□□ 0.73
COL4A2P08572 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
COL4A2P08572 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A2P08572 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.64■□□□□ 0.73
COL4A2P08572 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
COL4A2P08572 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A2P08572 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A2P08572 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A2P08572 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A2P08572 ATP5G2P1-201ENST00000433580 426 ntBASIC19.64■□□□□ 0.73
COL4A2P08572 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A2P08572 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A2P08572 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A2P08572 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
COL4A2P08572 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.64■□□□□ 0.73
COL4A2P08572 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.64■□□□□ 0.73
COL4A2P08572 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A2P08572 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL4A2P08572 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL4A2P08572 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
COL4A2P08572 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.63■□□□□ 0.73
COL4A2P08572 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL4A2P08572 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.63■□□□□ 0.73
COL4A2P08572 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.63■□□□□ 0.73
COL4A2P08572 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COL4A2P08572 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
COL4A2P08572 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL4A2P08572 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL4A2P08572 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL4A2P08572 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL4A2P08572 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.62■□□□□ 0.73
COL4A2P08572 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.62■□□□□ 0.73
COL4A2P08572 GCSHP2-201ENST00000560971 527 ntBASIC19.62■□□□□ 0.73
COL4A2P08572 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.62■□□□□ 0.73
COL4A2P08572 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL4A2P08572 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
COL4A2P08572 AL031432.5-201ENST00000641059 760 ntBASIC19.62■□□□□ 0.73
COL4A2P08572 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL4A2P08572 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.62■□□□□ 0.73
COL4A2P08572 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL4A2P08572 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL4A2P08572 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.62■□□□□ 0.73
COL4A2P08572 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.62■□□□□ 0.73
COL4A2P08572 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL4A2P08572 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms