Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COL1A1P02452 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
COL1A1P02452 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.46■■□□□ 1.35
COL1A1P02452 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC23.46■■□□□ 1.35
COL1A1P02452 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL1A1P02452 HMGA1P5-201ENST00000412453 271 ntBASIC23.46■■□□□ 1.35
COL1A1P02452 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC23.46■■□□□ 1.35
COL1A1P02452 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC23.46■■□□□ 1.35
COL1A1P02452 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
COL1A1P02452 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COL1A1P02452 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.46■■□□□ 1.35
COL1A1P02452 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL1A1P02452 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COL1A1P02452 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC23.46■■□□□ 1.35
COL1A1P02452 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COL1A1P02452 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COL1A1P02452 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
COL1A1P02452 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC23.46■■□□□ 1.35
COL1A1P02452 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COL1A1P02452 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
COL1A1P02452 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.46■■□□□ 1.35
COL1A1P02452 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.46■■□□□ 1.35
COL1A1P02452 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
COL1A1P02452 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL1A1P02452 HIST1H2APS4-201ENST00000362070 348 ntBASIC23.45■■□□□ 1.34
COL1A1P02452 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL1A1P02452 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC23.45■■□□□ 1.34
COL1A1P02452 AK4P3-201ENST00000418260 669 ntBASIC23.45■■□□□ 1.34
COL1A1P02452 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL1A1P02452 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC23.45■■□□□ 1.34
COL1A1P02452 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.45■■□□□ 1.34
COL1A1P02452 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
COL1A1P02452 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
COL1A1P02452 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
COL1A1P02452 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC23.45■■□□□ 1.34
COL1A1P02452 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
COL1A1P02452 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
COL1A1P02452 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
COL1A1P02452 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
COL1A1P02452 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.45■■□□□ 1.34
COL1A1P02452 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL1A1P02452 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.44■■□□□ 1.34
COL1A1P02452 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL1A1P02452 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.44■■□□□ 1.34
COL1A1P02452 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL1A1P02452 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL1A1P02452 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.44■■□□□ 1.34
COL1A1P02452 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC23.44■■□□□ 1.34
COL1A1P02452 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL1A1P02452 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.44■■□□□ 1.34
COL1A1P02452 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL1A1P02452 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
COL1A1P02452 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.44■■□□□ 1.34
COL1A1P02452 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL1A1P02452 FAM8A6P-201ENST00000407496 1135 ntBASIC23.43■■□□□ 1.34
COL1A1P02452 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC23.43■■□□□ 1.34
COL1A1P02452 BX664615.1-201ENST00000443558 458 ntBASIC23.43■■□□□ 1.34
COL1A1P02452 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL1A1P02452 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.43■■□□□ 1.34
COL1A1P02452 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
COL1A1P02452 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL1A1P02452 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.43■■□□□ 1.34
COL1A1P02452 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL1A1P02452 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL1A1P02452 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL1A1P02452 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.43■■□□□ 1.34
COL1A1P02452 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.43■■□□□ 1.34
COL1A1P02452 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL1A1P02452 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
COL1A1P02452 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL1A1P02452 GUK1-204ENST00000366721 689 ntTSL 3 BASIC23.43■■□□□ 1.34
COL1A1P02452 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL1A1P02452 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL1A1P02452 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC23.43■■□□□ 1.34
COL1A1P02452 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL1A1P02452 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.42■■□□□ 1.34
COL1A1P02452 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
COL1A1P02452 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL1A1P02452 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.42■■□□□ 1.34
COL1A1P02452 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.42■■□□□ 1.34
COL1A1P02452 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.42■■□□□ 1.34
COL1A1P02452 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.42■■□□□ 1.34
COL1A1P02452 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL1A1P02452 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL1A1P02452 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL1A1P02452 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
COL1A1P02452 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC23.42■■□□□ 1.34
COL1A1P02452 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.42■■□□□ 1.34
COL1A1P02452 AC091076.1-201ENST00000610741 619 ntBASIC23.42■■□□□ 1.34
COL1A1P02452 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
COL1A1P02452 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.42■■□□□ 1.34
COL1A1P02452 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL1A1P02452 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL1A1P02452 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL1A1P02452 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL1A1P02452 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
COL1A1P02452 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.41■■□□□ 1.34
COL1A1P02452 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
COL1A1P02452 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC23.41■■□□□ 1.34
COL1A1P02452 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms