Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.7■□□□□ 0.58
SLC28A2O43868 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC28A2O43868 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC28A2O43868 AL121894.2-201ENST00000602977 491 ntBASIC18.7■□□□□ 0.58
SLC28A2O43868 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.7■□□□□ 0.58
SLC28A2O43868 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SLC28A2O43868 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC28A2O43868 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC28A2O43868 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC28A2O43868 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC28A2O43868 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC28A2O43868 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SLC28A2O43868 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC28A2O43868 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC28A2O43868 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SLC28A2O43868 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.69■□□□□ 0.58
SLC28A2O43868 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC28A2O43868 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC28A2O43868 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC28A2O43868 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC28A2O43868 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.69■□□□□ 0.58
SLC28A2O43868 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SLC28A2O43868 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC28A2O43868 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC28A2O43868 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SLC28A2O43868 AL137013.1-201ENST00000432946 1228 ntBASIC18.69■□□□□ 0.58
SLC28A2O43868 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
SLC28A2O43868 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SLC28A2O43868 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC28A2O43868 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC28A2O43868 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC28A2O43868 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SLC28A2O43868 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC28A2O43868 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC28A2O43868 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SLC28A2O43868 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC28A2O43868 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC28A2O43868 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC28A2O43868 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC28A2O43868 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SLC28A2O43868 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC28A2O43868 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SLC28A2O43868 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC28A2O43868 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SLC28A2O43868 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC28A2O43868 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC28A2O43868 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SLC28A2O43868 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC28A2O43868 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC28A2O43868 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC28A2O43868 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC28A2O43868 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC28A2O43868 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.68■□□□□ 0.58
SLC28A2O43868 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC28A2O43868 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC28A2O43868 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC28A2O43868 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC28A2O43868 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SLC28A2O43868 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SLC28A2O43868 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC28A2O43868 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SLC28A2O43868 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC28A2O43868 AC007952.6-201ENST00000573168 2673 ntBASIC18.68■□□□□ 0.58
SLC28A2O43868 AC003957.1-201ENST00000625108 2673 ntBASIC18.68■□□□□ 0.58
SLC28A2O43868 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SLC28A2O43868 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC28A2O43868 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SLC28A2O43868 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC28A2O43868 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC28A2O43868 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC28A2O43868 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC28A2O43868 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC28A2O43868 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SLC28A2O43868 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC28A2O43868 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC28A2O43868 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC28A2O43868 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC28A2O43868 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC28A2O43868 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC28A2O43868 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC28A2O43868 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC28A2O43868 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SLC28A2O43868 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC28A2O43868 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.67■□□□□ 0.58
SLC28A2O43868 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC28A2O43868 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SLC28A2O43868 AC120498.8-201ENST00000614275 531 ntBASIC18.67■□□□□ 0.58
SLC28A2O43868 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.67■□□□□ 0.58
SLC28A2O43868 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC28A2O43868 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SLC28A2O43868 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC28A2O43868 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC28A2O43868 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC28A2O43868 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC28A2O43868 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC28A2O43868 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC28A2O43868 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SLC28A2O43868 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC28A2O43868 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC28A2O43868 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms