Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.15■□□□□ 0.5
AP3D1O14617 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.14■□□□□ 0.5
AP3D1O14617 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
AP3D1O14617 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3D1O14617 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
AP3D1O14617 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3D1O14617 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3D1O14617 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3D1O14617 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.14■□□□□ 0.49
AP3D1O14617 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.14■□□□□ 0.49
AP3D1O14617 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP3D1O14617 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.14■□□□□ 0.49
AP3D1O14617 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP3D1O14617 AC104771.1-201ENST00000603335 964 ntBASIC18.14■□□□□ 0.49
AP3D1O14617 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3D1O14617 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3D1O14617 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3D1O14617 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3D1O14617 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3D1O14617 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP3D1O14617 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.14■□□□□ 0.49
AP3D1O14617 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
AP3D1O14617 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3D1O14617 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP3D1O14617 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.13■□□□□ 0.49
AP3D1O14617 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3D1O14617 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.13■□□□□ 0.49
AP3D1O14617 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.13■□□□□ 0.49
AP3D1O14617 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP3D1O14617 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3D1O14617 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.13■□□□□ 0.49
AP3D1O14617 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3D1O14617 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.13■□□□□ 0.49
AP3D1O14617 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP3D1O14617 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
AP3D1O14617 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP3D1O14617 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3D1O14617 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP3D1O14617 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP3D1O14617 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.13■□□□□ 0.49
AP3D1O14617 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3D1O14617 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
AP3D1O14617 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.13■□□□□ 0.49
AP3D1O14617 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
AP3D1O14617 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.13■□□□□ 0.49
AP3D1O14617 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.13■□□□□ 0.49
AP3D1O14617 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3D1O14617 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3D1O14617 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3D1O14617 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
AP3D1O14617 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP3D1O14617 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
AP3D1O14617 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.12■□□□□ 0.49
AP3D1O14617 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.12■□□□□ 0.49
AP3D1O14617 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
AP3D1O14617 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3D1O14617 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP3D1O14617 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.12■□□□□ 0.49
AP3D1O14617 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
AP3D1O14617 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.12■□□□□ 0.49
AP3D1O14617 MYC-209ENST00000641252 345 ntBASIC18.12■□□□□ 0.49
AP3D1O14617 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
AP3D1O14617 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3D1O14617 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP3D1O14617 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3D1O14617 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.12■□□□□ 0.49
AP3D1O14617 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3D1O14617 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3D1O14617 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.12■□□□□ 0.49
AP3D1O14617 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3D1O14617 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3D1O14617 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.12■□□□□ 0.49
AP3D1O14617 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
AP3D1O14617 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3D1O14617 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
AP3D1O14617 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.11■□□□□ 0.49
AP3D1O14617 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
AP3D1O14617 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3D1O14617 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3D1O14617 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3D1O14617 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.11■□□□□ 0.49
AP3D1O14617 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.11■□□□□ 0.49
AP3D1O14617 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.11■□□□□ 0.49
AP3D1O14617 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.11■□□□□ 0.49
AP3D1O14617 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
AP3D1O14617 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.11■□□□□ 0.49
AP3D1O14617 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.11■□□□□ 0.49
AP3D1O14617 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AP3D1O14617 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.11■□□□□ 0.49
AP3D1O14617 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
AP3D1O14617 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3D1O14617 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.11■□□□□ 0.49
AP3D1O14617 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
AP3D1O14617 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AP3D1O14617 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3D1O14617 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3D1O14617 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP3D1O14617 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.1■□□□□ 0.49
AP3D1O14617 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3D1O14617 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms