Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV5S1A1TA0A578 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 AC087289.5-201ENST00000586076 3175 ntBASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 AL161938.1-201ENST00000569833 2180 ntBASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 AC239809.2-201ENST00000415381 517 ntBASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.3■□□□□ 0.84
TCRBV5S1A1TA0A578 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
TCRBV5S1A1TA0A578 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TCRBV5S1A1TA0A578 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.29■□□□□ 0.84
TCRBV5S1A1TA0A578 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.29■□□□□ 0.84
TCRBV5S1A1TA0A578 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV5S1A1TA0A578 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.29■□□□□ 0.84
TCRBV5S1A1TA0A578 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TCRBV5S1A1TA0A578 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV5S1A1TA0A578 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.29■□□□□ 0.84
TCRBV5S1A1TA0A578 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV5S1A1TA0A578 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
TCRBV5S1A1TA0A578 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV5S1A1TA0A578 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TCRBV5S1A1TA0A578 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.29■□□□□ 0.84
TCRBV5S1A1TA0A578 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.29■□□□□ 0.84
TCRBV5S1A1TA0A578 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
TCRBV5S1A1TA0A578 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.29■□□□□ 0.84
TCRBV5S1A1TA0A578 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.29■□□□□ 0.84
TCRBV5S1A1TA0A578 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV5S1A1TA0A578 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV5S1A1TA0A578 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 KRT16P5-201ENST00000455284 522 ntBASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 AC004264.1-201ENST00000608354 794 ntBASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV5S1A1TA0A578 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TCRBV5S1A1TA0A578 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms