Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 SP2-202ENST00000613139 908 ntTSL 5 BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 AC116351.2-201ENST00000606540 1585 ntBASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 ZNF815P-204ENST00000434898 1737 ntBASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV27A0A0K0K1C4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 AC005837.3-201ENST00000612163 286 ntBASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV27A0A0K0K1C4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 BICD1-207ENST00000551848 1962 ntBASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms