Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
KCNIP3Q9Y2W7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.87□□□□□ -1.79
KCNIP3Q9Y2W7 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AL031119.1-201ENST00000404707 1879 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 TMSB4XP4-201ENST00000323496 618 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 RNA5SP183-201ENST00000362452 119 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 RNA5SP428-201ENST00000365129 132 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 RNU6-452P-201ENST00000384406 107 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 RPL31P52-201ENST00000407532 367 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 MORN2-202ENST00000409077 465 ntTSL 5 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 RN7SKP59-201ENST00000410520 314 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 RNA5SP39-201ENST00000411245 120 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AMD1P2-201ENST00000412936 992 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AC114755.2-201ENST00000413520 361 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 IPPKP1-201ENST00000422501 768 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 CR848007.2-201ENST00000424918 787 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AC073335.1-201ENST00000427776 363 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AC073069.1-201ENST00000428657 441 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 RPL12P28-201ENST00000430852 489 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 RPS24P8-201ENST00000431490 402 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AL161636.2-201ENST00000445179 927 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 RPS27AP15-201ENST00000447672 466 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 MTND5P8-201ENST00000449817 1083 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 SYT14P1-201ENST00000481459 721 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AC006499.6-201ENST00000511169 607 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AC092851.1-201ENST00000535964 478 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AL109741.3-201ENST00000561748 592 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AC011447.4-201ENST00000587562 111 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 RNA5SP440-201ENST00000612665 119 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 uc_338.32-201ENST00000615087 172 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 AC116563.2-201ENST00000624751 535 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 CASC19-264ENST00000641912 1184 ntBASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
KCNIP3Q9Y2W7 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 SNORA62.2-201ENST00000364672 152 ntBASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 FCF1P5-201ENST00000406490 482 ntBASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 SEC63P1-201ENST00000425785 1258 ntBASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 YY1P1-201ENST00000427625 668 ntBASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 CBX1P4-201ENST00000439415 457 ntBASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 MED6P1-201ENST00000439659 713 ntBASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 RPL34P20-201ENST00000442771 351 ntBASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 MTND2P3-201ENST00000452458 470 ntBASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 IFNWP4-201ENST00000453148 294 ntBASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 FABP3P2-201ENST00000453169 399 ntBASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 RPL23AP56-201ENST00000460778 453 ntBASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 AC090013.1-201ENST00000485147 480 ntBASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 RN7SL649P-201ENST00000496974 275 ntBASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 AC098799.3-201ENST00000506095 438 ntBASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 PGAM1P13-201ENST00000507497 754 ntBASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 AC015795.1-201ENST00000513669 327 ntBASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 RNA5SP473-201ENST00000516402 125 ntBASIC3.85□□□□□ -1.79
KCNIP3Q9Y2W7 RNU6-362P-201ENST00000516736 90 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms