Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RN7SKP256-201ENST00000517201 314 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 IGLVIV-64-201ENST00000518581 301 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 COX6B1P6-201ENST00000522347 255 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AP001803.1-201ENST00000525668 147 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AC023310.2-201ENST00000553844 547 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 MYL12BP1-201ENST00000569826 507 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AC011497.2-201ENST00000600255 639 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AP001330.4-201ENST00000604350 154 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 MIR98-201ENST00000606724 119 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AC063962.1-201ENST00000608199 521 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AC233309.1-201ENST00000619522 751 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AC090617.10-201ENST00000624308 134 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 MTND4LP32-201ENST00000636111 270 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AL359263.1-201ENST00000441188 2796 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 AC022819.1-201ENST00000563495 3910 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 ELL2P4-201ENST00000446870 1376 ntBASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CUEDC1Q9NWM3 LCOR-201ENST00000286067 4542 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 VDAC1P10-201ENST00000416715 891 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 NIPA2P1-201ENST00000426223 976 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 SRIP2-201ENST00000428470 166 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AC073069.1-201ENST00000428657 441 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AL606489.2-201ENST00000433886 234 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AL138899.2-201ENST00000439139 499 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 SDHCP3-201ENST00000445371 506 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 HIGD1AP16-201ENST00000450986 258 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 GAPDHP53-201ENST00000458397 924 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 RN7SL325P-201ENST00000460434 283 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 RPSAP48-201ENST00000466509 889 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 RPL23AP71-201ENST00000470966 469 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AL591122.1-201ENST00000487348 492 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 RPL19P11-201ENST00000495944 589 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AC006390.1-201ENST00000508068 283 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 snoU109.6-201ENST00000516831 118 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 SNORA25.17-201ENST00000517184 124 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 RNU6-1261P-201ENST00000517194 104 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AC138832.1-201ENST00000522871 556 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AC089984.3-201ENST00000552838 363 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AC008966.2-201ENST00000606157 453 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AC078899.5-201ENST00000612475 178 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AL161420.1-201ENST00000619393 264 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AL732618.1-201ENST00000623251 301 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AC087894.3-201ENST00000623682 349 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms