Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 Z99497.2-201ENST00000603634 310 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 AC069545.1-201ENST00000605671 358 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 AC018638.7-201ENST00000605836 1114 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 FAM25E-202ENST00000608562 189 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 VIS1.1-201ENST00000610517 203 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 MIR6820-201ENST00000611508 62 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 AL450489.1-201ENST00000612071 468 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VTA1Q9NP79 AC022509.4-201ENST00000621404 572 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 AC109446.4-201ENST00000623235 2755 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 AP003400.3-201ENST00000624904 346 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 AC135068.12-201ENST00000637370 931 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
VTA1Q9NP79 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VTA1Q9NP79 KYNUP3-201ENST00000574386 1341 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VTA1Q9NP79 BCORP1-203ENST00000513194 5093 ntBASIC5.95□□□□□ -1.46
VTA1Q9NP79 TTC39DP-201ENST00000416781 1688 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VTA1Q9NP79 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 AC079097.1-201ENST00000512187 1399 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 AL360270.2-201ENST00000562952 5985 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VTA1Q9NP79 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
VTA1Q9NP79 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VTA1Q9NP79 SGO1P1-201ENST00000603525 1447 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 CASC19-206ENST00000641028 1430 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VTA1Q9NP79 SNORA51.8-201ENST00000384234 132 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 SKINT1L-201ENST00000401057 817 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 MIR1182-201ENST00000408363 97 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 Y_RNA.625-201ENST00000411256 107 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 USP9YP31-201ENST00000431405 881 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 USP9YP22-201ENST00000438971 294 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VTA1Q9NP79 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 ART2BP-201ENST00000453501 499 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 AL133477.1-201ENST00000457472 514 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 RPS3AP41-201ENST00000462701 778 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 AL161747.1-201ENST00000480068 358 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 BET1P1-201ENST00000482276 359 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 RNU6-1129P-201ENST00000515964 104 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 SCARNA20.4-201ENST00000516969 131 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 MIR4480-201ENST00000582492 71 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 PIGPP4-201ENST00000584447 307 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 AC010487.1-201ENST00000594408 1172 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 BNIP3P26-201ENST00000600827 554 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 AL133507.1-201ENST00000605269 557 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 AC244107.2-201ENST00000611773 76 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 AC091905.4-201ENST00000623432 202 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 AC016717.3-201ENST00000624730 554 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VTA1Q9NP79 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VTA1Q9NP79 AL606537.1-201ENST00000607258 2011 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
VTA1Q9NP79 AL138820.1-201ENST00000617901 5305 ntBASIC5.94□□□□□ -1.46
VTA1Q9NP79 MAPK10-338ENST00000641647 3362 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 AC096656.1-201ENST00000623826 1364 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
VTA1Q9NP79 AC092681.1-201ENST00000297369 291 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 MIR16-1-201ENST00000385271 89 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VTA1Q9NP79 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VTA1Q9NP79 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 AL445213.1-201ENST00000412589 747 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.93□□□□□ -1.46
VTA1Q9NP79 MOB1AP1-201ENST00000430903 535 ntBASIC5.93□□□□□ -1.46
VTA1Q9NP79 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms