Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 SUMO2P5-201ENST00000506790 245 ntBASIC4.91□□□□□ -1.62
PCDH9Q9HC56 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 MORF4L1P3-201ENST00000525966 950 ntBASIC4.91□□□□□ -1.62
PCDH9Q9HC56 OR7E13P-201ENST00000526052 910 ntBASIC4.91□□□□□ -1.62
PCDH9Q9HC56 AL390726.5-202ENST00000564800 256 ntBASIC4.91□□□□□ -1.62
PCDH9Q9HC56 AC023825.1-201ENST00000566704 1030 ntBASIC4.91□□□□□ -1.62
PCDH9Q9HC56 SUMO2P14-201ENST00000604488 293 ntBASIC4.91□□□□□ -1.62
PCDH9Q9HC56 AC124016.2-201ENST00000610058 665 ntBASIC4.91□□□□□ -1.62
PCDH9Q9HC56 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 AC006927.4-201ENST00000639187 543 ntBASIC4.91□□□□□ -1.62
PCDH9Q9HC56 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.9□□□□□ -1.62
PCDH9Q9HC56 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.9□□□□□ -1.62
PCDH9Q9HC56 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.9□□□□□ -1.62
PCDH9Q9HC56 HSPD1P14-201ENST00000432666 1618 ntBASIC4.9□□□□□ -1.62
PCDH9Q9HC56 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDH9Q9HC56 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.9□□□□□ -1.62
PCDH9Q9HC56 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PCDH9Q9HC56 RNU6-252P-201ENST00000363232 107 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AL355615.1-201ENST00000406187 641 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 RPS26P13-201ENST00000419030 330 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AC007394.1-201ENST00000421941 531 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 BRWD1P3-201ENST00000428816 390 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 MTCO1P43-201ENST00000431831 488 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 TMX2P1-201ENST00000436507 708 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 RPL12P3-201ENST00000440080 396 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 OR52J1P-201ENST00000450596 932 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AC234781.3-201ENST00000452540 973 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 HIGD1AP8-201ENST00000453927 274 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AC069277.2-201ENST00000454211 432 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 snoU109.3-201ENST00000459477 145 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AC104971.1-201ENST00000495117 578 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AC118282.1-201ENST00000506408 765 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AC010476.1-201ENST00000519111 851 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AC021451.1-201ENST00000523498 1129 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 OR1F2P-201ENST00000570470 933 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AP000919.1-202ENST00000581139 1264 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AC021851.1-201ENST00000608537 1082 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AC007497.1-201ENST00000610421 561 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AL512427.1-201ENST00000618593 349 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AC087385.3-201ENST00000620477 187 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AC097520.1-201ENST00000624435 385 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AC132825.1-201ENST00000463573 2247 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 SAMMSON-226ENST00000642089 1582 ntBASIC4.9□□□□□ -1.63
PCDH9Q9HC56 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PCDH9Q9HC56 AC139713.2-215ENST00000641428 5037 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 RN7SKP149-201ENST00000363008 344 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 RPL22P22-201ENST00000395439 379 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 MIR921-201ENST00000401133 56 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AC096533.1-201ENST00000411645 353 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AC106883.1-201ENST00000418805 562 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 Z74021.1-201ENST00000423610 407 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AL645608.4-201ENST00000423619 154 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDH9Q9HC56 USP12PY-201ENST00000427677 1064 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 PA2G4P6-201ENST00000438325 1197 ntBASIC4.89□□□□□ -1.63
PCDH9Q9HC56 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms