Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AP000648.2-201ENST00000624182 404 ntBASIC4.98□□□□□ -1.61
POLR1BQ9H9Y6 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.98□□□□□ -1.61
POLR1BQ9H9Y6 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.98□□□□□ -1.61
POLR1BQ9H9Y6 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
POLR1BQ9H9Y6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.98□□□□□ -1.61
POLR1BQ9H9Y6 ZNF849P-201ENST00000594711 1566 ntBASIC4.98□□□□□ -1.61
POLR1BQ9H9Y6 AC005332.5-201ENST00000591222 2919 ntBASIC4.98□□□□□ -1.61
POLR1BQ9H9Y6 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
POLR1BQ9H9Y6 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
POLR1BQ9H9Y6 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
POLR1BQ9H9Y6 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
POLR1BQ9H9Y6 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
POLR1BQ9H9Y6 AL445437.1-201ENST00000623157 3087 ntBASIC4.98□□□□□ -1.61
POLR1BQ9H9Y6 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
POLR1BQ9H9Y6 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 SDAD1P1-202ENST00000524156 2051 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 MAPK10-263ENST00000641052 4307 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 RNU6-398P-201ENST00000384143 109 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AL356967.1-201ENST00000406305 431 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 EI24P4-201ENST00000423683 1078 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 C4BPAP2-201ENST00000428434 478 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 FO393414.1-201ENST00000428697 1184 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AC011242.1-201ENST00000433596 1158 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 ARF4P4-201ENST00000439608 520 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 ARL5AP2-201ENST00000444698 533 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 NDUFA12P1-201ENST00000455914 406 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 RNU6-1218P-201ENST00000458990 108 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AL591473.1-201ENST00000464297 313 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AL672167.3-201ENST00000465951 960 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 RN7SL459P-201ENST00000481078 302 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 METTL15P1-201ENST00000481421 1045 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 RN7SL244P-201ENST00000493405 297 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 HMGB3P16-201ENST00000508037 287 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 BGLT3-201ENST00000564523 994 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 ATP5F1P7-201ENST00000567330 760 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AC090666.1-201ENST00000578241 445 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AL158050.2-201ENST00000605336 568 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AC096586.1-201ENST00000610267 561 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AC012414.7-202ENST00000622705 1090 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AC024595.1-201ENST00000623088 387 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AC126544.2-201ENST00000625174 749 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AC004808.1-201ENST00000627671 721 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 AL445984.1-201ENST00000637834 659 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 LINC01355-201ENST00000566551 5444 ntBASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
POLR1BQ9H9Y6 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.61
POLR1BQ9H9Y6 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
POLR1BQ9H9Y6 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
POLR1BQ9H9Y6 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
POLR1BQ9H9Y6 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
POLR1BQ9H9Y6 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
POLR1BQ9H9Y6 RNU5B-4P-201ENST00000363508 111 ntBASIC4.96□□□□□ -1.62
POLR1BQ9H9Y6 SNORA62-201ENST00000365493 153 ntBASIC4.96□□□□□ -1.62
POLR1BQ9H9Y6 RNU6-317P-201ENST00000384031 107 ntBASIC4.96□□□□□ -1.62
POLR1BQ9H9Y6 RNU6-98P-201ENST00000384173 107 ntBASIC4.96□□□□□ -1.62
POLR1BQ9H9Y6 OR8V1P-201ENST00000395193 873 ntBASIC4.96□□□□□ -1.62
POLR1BQ9H9Y6 AP002530.1-201ENST00000405705 684 ntBASIC4.96□□□□□ -1.62
POLR1BQ9H9Y6 RPS16P5-201ENST00000406501 404 ntBASIC4.96□□□□□ -1.62
POLR1BQ9H9Y6 RN7SKP16-201ENST00000410180 299 ntBASIC4.96□□□□□ -1.62
POLR1BQ9H9Y6 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.96□□□□□ -1.62
POLR1BQ9H9Y6 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.96□□□□□ -1.62
POLR1BQ9H9Y6 MTND2P9-201ENST00000422293 931 ntBASIC4.96□□□□□ -1.62
POLR1BQ9H9Y6 AC012519.1-201ENST00000424588 610 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms