Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.58□□□□□ -1.68
VIPAS39Q9H9C1 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.58□□□□□ -1.68
VIPAS39Q9H9C1 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VIPAS39Q9H9C1 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VIPAS39Q9H9C1 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VIPAS39Q9H9C1 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.58□□□□□ -1.68
VIPAS39Q9H9C1 CPHL1P-201ENST00000461341 3407 ntBASIC4.58□□□□□ -1.68
VIPAS39Q9H9C1 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 AC024341.1-201ENST00000526444 1552 ntBASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 RNU1-89P-201ENST00000384592 164 ntBASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 MIR1911-201ENST00000410783 80 ntBASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 RPEP2-201ENST00000432149 701 ntBASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 RPL7P28-201ENST00000437739 740 ntBASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 AF228730.2-201ENST00000438784 848 ntBASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 AL513321.1-201ENST00000441175 761 ntBASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 TPTE2P3-201ENST00000441562 1189 ntBASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 AC007000.2-201ENST00000442564 487 ntBASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 PTMAP3-201ENST00000447474 330 ntBASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 RPL36AP41-201ENST00000493820 306 ntBASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 AL592156.1-201ENST00000508758 304 ntBASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 HAUS1P3-201ENST00000523909 662 ntBASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 AL096803.3-201ENST00000609032 532 ntBASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 FAM27B-201ENST00000610601 213 ntBASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VIPAS39Q9H9C1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 AL450326.2-201ENST00000421913 1962 ntBASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 AC132825.1-201ENST00000463573 2247 ntBASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 TMSB4XP4-201ENST00000323496 618 ntBASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 RNU6-532P-201ENST00000384318 107 ntBASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 AL031985.1-201ENST00000392713 418 ntBASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 Z98745.1-201ENST00000402553 494 ntBASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 AP002530.1-201ENST00000405705 684 ntBASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 ARL2BPP3-201ENST00000421226 480 ntBASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 RPL23AP89-201ENST00000439324 255 ntBASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 AC092691.2-201ENST00000461787 803 ntBASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 AC008410.1-201ENST00000483777 339 ntBASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 PPIAP19-201ENST00000486414 492 ntBASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 RN7SL205P-201ENST00000490174 284 ntBASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 AC016180.1-201ENST00000567945 403 ntBASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 RNA5SP440-201ENST00000612665 119 ntBASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 AL512506.1-201ENST00000613918 449 ntBASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 BRAFP1-201ENST00000445336 2703 ntBASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.56□□□□□ -1.68
VIPAS39Q9H9C1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms