Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RPS17P17-201ENST00000419392 409 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 EIF4EP1-201ENST00000422311 642 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 SNAP23P1-201ENST00000433229 246 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 RPL23AP89-201ENST00000439324 255 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 MED28P3-201ENST00000444288 531 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 HSFY6P-201ENST00000445573 403 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 RPL23AP43-201ENST00000446445 471 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 AC011225.1-201ENST00000457751 369 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 RN7SL706P-201ENST00000460079 292 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 AC234782.3-201ENST00000461229 433 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
USB1Q9BQ65 RN7SL91P-201ENST00000469313 291 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 SIAH1P1-201ENST00000479411 923 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
USB1Q9BQ65 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 IGLV10-67-201ENST00000519446 325 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 AC078899.1-201ENST00000521432 1185 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 HMGB1P42-201ENST00000532126 553 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 CYCSP28-201ENST00000534284 321 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 MT1L-202ENST00000566367 78 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 AC022239.4-201ENST00000602626 504 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 AC133644.2-201ENST00000608142 540 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 AC098479.1-201ENST00000609225 154 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 AL096712.1-201ENST00000614561 159 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 MIR6128-201ENST00000615528 109 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 RPL36AP21-202ENST00000639134 430 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 MFSD8-217ENST00000641178 4374 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
USB1Q9BQ65 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
USB1Q9BQ65 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
USB1Q9BQ65 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 AC025040.2-201ENST00000558657 1852 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC6.87□□□□□ -1.31
USB1Q9BQ65 AL121768.1-201ENST00000613917 2544 ntBASIC6.87□□□□□ -1.31
USB1Q9BQ65 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
USB1Q9BQ65 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USB1Q9BQ65 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USB1Q9BQ65 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
USB1Q9BQ65 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USB1Q9BQ65 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USB1Q9BQ65 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
USB1Q9BQ65 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 AC068860.1-201ENST00000623701 3736 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
USB1Q9BQ65 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 TRIM51GP-201ENST00000534741 1350 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
USB1Q9BQ65 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USB1Q9BQ65 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
USB1Q9BQ65 Y_RNA.152-201ENST00000363578 100 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 RNU5A-8P-201ENST00000364102 114 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 RN7SKP1-201ENST00000365525 307 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USB1Q9BQ65 Y_RNA.428-201ENST00000384078 102 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 SNORA10-201ENST00000384084 133 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 RNU6-441P-201ENST00000384545 106 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USB1Q9BQ65 DUTP4-201ENST00000424782 475 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 HMGB1P9-201ENST00000429856 646 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 AC231532.1-201ENST00000438584 312 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 AC108734.1-201ENST00000439549 399 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
USB1Q9BQ65 AL161454.1-201ENST00000446226 569 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC6.86□□□□□ -1.31
USB1Q9BQ65 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 AC079804.1-201ENST00000461922 436 ntBASIC6.86□□□□□ -1.31
USB1Q9BQ65 RN7SL19P-201ENST00000462522 306 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms