Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VGLL1Q99990 AC245100.2-201ENST00000454544 1679 ntBASIC3.84□□□□□ -1.8
VGLL1Q99990 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VGLL1Q99990 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.8
VGLL1Q99990 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
VGLL1Q99990 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VGLL1Q99990 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VGLL1Q99990 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.83□□□□□ -1.8
VGLL1Q99990 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
VGLL1Q99990 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
VGLL1Q99990 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VGLL1Q99990 MAPK10-320ENST00000641462 6696 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC3.83□□□□□ -1.8
VGLL1Q99990 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
VGLL1Q99990 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VGLL1Q99990 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VGLL1Q99990 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VGLL1Q99990 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
VGLL1Q99990 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC3.83□□□□□ -1.8
VGLL1Q99990 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VGLL1Q99990 U3.3-201ENST00000362986 216 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 RNU4-51P-201ENST00000364206 140 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 RN7SKP124-201ENST00000364730 341 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VGLL1Q99990 SNORA2.3-201ENST00000383920 135 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 SNORD65C-201ENST00000390962 71 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 RNA5SP339-201ENST00000390987 122 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 SNORA17A-201ENST00000391185 133 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC3.83□□□□□ -1.8
VGLL1Q99990 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.83□□□□□ -1.8
VGLL1Q99990 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.83□□□□□ -1.8
VGLL1Q99990 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.83□□□□□ -1.8
VGLL1Q99990 HMGB3P31-201ENST00000413333 595 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 RPS7P9-201ENST00000414704 586 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.83□□□□□ -1.8
VGLL1Q99990 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.83□□□□□ -1.8
VGLL1Q99990 MTND4P3-201ENST00000417829 541 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 LINC01347-201ENST00000417964 355 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 AC234781.4-201ENST00000419384 244 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC3.83□□□□□ -1.8
VGLL1Q99990 AC093084.1-201ENST00000424233 687 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC3.83□□□□□ -1.8
VGLL1Q99990 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VGLL1Q99990 AC079807.1-201ENST00000429993 481 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 FAM96AP1-201ENST00000430879 482 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 VN1R108P-201ENST00000431580 830 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 AL035458.1-201ENST00000433096 585 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.83□□□□□ -1.8
VGLL1Q99990 CYCSP6-201ENST00000434498 302 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 AC093716.1-201ENST00000435923 377 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VGLL1Q99990 HSFY3P-201ENST00000444242 1191 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.83□□□□□ -1.8
VGLL1Q99990 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VGLL1Q99990 OR6K5P-201ENST00000447050 945 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 OR51B8P-201ENST00000449892 769 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.83□□□□□ -1.8
VGLL1Q99990 SIAH1P1-201ENST00000479411 923 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC3.83□□□□□ -1.8
VGLL1Q99990 AC011037.1-201ENST00000483964 558 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC3.83□□□□□ -1.8
VGLL1Q99990 SSX6-203ENST00000509958 336 ntTSL 3 BASIC3.83□□□□□ -1.8
VGLL1Q99990 AC108120.2-201ENST00000512973 294 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.83□□□□□ -1.8
VGLL1Q99990 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.83□□□□□ -1.8
VGLL1Q99990 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.83□□□□□ -1.8
VGLL1Q99990 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC3.83□□□□□ -1.8
VGLL1Q99990 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.83□□□□□ -1.8
VGLL1Q99990 NDUFB4P11-201ENST00000560510 395 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.83□□□□□ -1.8
VGLL1Q99990 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC3.83□□□□□ -1.8
VGLL1Q99990 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC3.83□□□□□ -1.8
VGLL1Q99990 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.83□□□□□ -1.8
VGLL1Q99990 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.83□□□□□ -1.8
VGLL1Q99990 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.83□□□□□ -1.8
VGLL1Q99990 AC124856.1-201ENST00000600819 896 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 AL353778.1-201ENST00000603149 408 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 AC104695.2-201ENST00000605056 775 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 AC126175.1-201ENST00000617041 758 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 LINC00901.1-201ENST00000617252 152 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 AC010975.3-201ENST00000618727 978 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 MIR8080-201ENST00000622224 89 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 AC004943.3-201ENST00000624116 600 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.83□□□□□ -1.8
VGLL1Q99990 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.83□□□□□ -1.8
VGLL1Q99990 SNORA17.5-201ENST00000630429 132 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
VGLL1Q99990 AC090897.3-201ENST00000636973 1157 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 AC135068.12-201ENST00000637370 931 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC3.83□□□□□ -1.8
VGLL1Q99990 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
VGLL1Q99990 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.83□□□□□ -1.8
VGLL1Q99990 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC3.83□□□□□ -1.8
VGLL1Q99990 AC104118.1-201ENST00000607625 1589 ntBASIC3.83□□□□□ -1.8
VGLL1Q99990 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC3.83□□□□□ -1.8
VGLL1Q99990 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.83□□□□□ -1.8
VGLL1Q99990 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC3.83□□□□□ -1.8
VGLL1Q99990 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VGLL1Q99990 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
VGLL1Q99990 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms