Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 POLR2KP1-201ENST00000553226 168 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 DUXAP1-201ENST00000556632 463 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 AC009237.13-201ENST00000603193 276 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 AC099676.1-201ENST00000608886 657 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 BX323046.1-201ENST00000610145 535 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 AC013562.2-201ENST00000611632 603 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 uc_338.7-201ENST00000621834 124 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 AC091932.2-201ENST00000623014 291 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 AC079248.2-201ENST00000623779 326 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 CASC19-222ENST00000641321 1173 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SNX18Q96RF0 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SNX18Q96RF0 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.01□□□□□ -1.61
SNX18Q96RF0 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SNX18Q96RF0 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.01□□□□□ -1.61
SNX18Q96RF0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SNX18Q96RF0 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5□□□□□ -1.61
SNX18Q96RF0 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SNX18Q96RF0 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
SNX18Q96RF0 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5□□□□□ -1.61
SNX18Q96RF0 SGO1P2-201ENST00000429458 1589 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5□□□□□ -1.61
SNX18Q96RF0 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5□□□□□ -1.61
SNX18Q96RF0 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5□□□□□ -1.61
SNX18Q96RF0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
SNX18Q96RF0 TTC39DP-201ENST00000416781 1688 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SNX18Q96RF0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5□□□□□ -1.61
SNX18Q96RF0 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5□□□□□ -1.61
SNX18Q96RF0 FAM3C2-201ENST00000312214 681 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 GAPDHP24-201ENST00000328713 983 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5□□□□□ -1.61
SNX18Q96RF0 SNORA64.1-201ENST00000362600 132 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 Y_RNA.51-201ENST00000362725 102 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 RNU4-44P-201ENST00000363050 141 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 Y_RNA.192-201ENST00000363977 102 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
SNX18Q96RF0 RNA5SP241-201ENST00000391326 114 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5□□□□□ -1.61
SNX18Q96RF0 AL021407.1-201ENST00000404531 386 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 AL138880.1-201ENST00000405824 642 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 AL031779.1-201ENST00000415663 330 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 AL513325.1-201ENST00000417716 1034 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5□□□□□ -1.61
SNX18Q96RF0 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5□□□□□ -1.61
SNX18Q96RF0 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5□□□□□ -1.61
SNX18Q96RF0 CYCSP11-201ENST00000436426 315 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 ISCA1P2-201ENST00000438679 421 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5□□□□□ -1.61
SNX18Q96RF0 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5□□□□□ -1.61
SNX18Q96RF0 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5□□□□□ -1.61
SNX18Q96RF0 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5□□□□□ -1.61
SNX18Q96RF0 AC026348.1-201ENST00000462549 1053 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
SNX18Q96RF0 AC011979.1-201ENST00000472300 483 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 BZW1P2-201ENST00000473537 826 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 AP000797.2-201ENST00000475768 606 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5□□□□□ -1.61
SNX18Q96RF0 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5□□□□□ -1.61
SNX18Q96RF0 LAMTOR3P2-201ENST00000504479 232 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5□□□□□ -1.61
SNX18Q96RF0 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5□□□□□ -1.61
SNX18Q96RF0 MTND4P2-201ENST00000507767 1203 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 AC016559.2-201ENST00000510759 359 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 RPL7L1P4-201ENST00000513004 707 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5□□□□□ -1.61
SNX18Q96RF0 SNORA70.20-201ENST00000516848 126 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 IGLV3-30-201ENST00000524362 298 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 AP002812.4-201ENST00000532139 286 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5□□□□□ -1.61
SNX18Q96RF0 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5□□□□□ -1.61
SNX18Q96RF0 AC090022.1-201ENST00000546569 311 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 DCN-210ENST00000547568 823 ntTSL 3 BASIC5□□□□□ -1.61
SNX18Q96RF0 AC023161.2-201ENST00000551218 780 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 HSPE1P2-201ENST00000554777 306 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
SNX18Q96RF0 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5□□□□□ -1.61
SNX18Q96RF0 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5□□□□□ -1.61
SNX18Q96RF0 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5□□□□□ -1.61
SNX18Q96RF0 AC103987.3-201ENST00000582071 292 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 RN7SL435P-201ENST00000584418 282 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5□□□□□ -1.61
SNX18Q96RF0 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SNX18Q96RF0 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SNX18Q96RF0 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5□□□□□ -1.61
SNX18Q96RF0 AC106791.2-201ENST00000604680 391 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 AL163642.2-201ENST00000604722 1019 ntBASIC5□□□□□ -1.61
SNX18Q96RF0 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5□□□□□ -1.61
SNX18Q96RF0 AC091931.1-201ENST00000623488 728 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms