Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNA5SP307-201ENST00000362863 116 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 CHMP1B2P-201ENST00000399581 597 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 RNA5SP306-201ENST00000411087 107 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 SNORA74C-2-201ENST00000411179 201 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 OR51B3P-201ENST00000412287 913 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 AC140479.3-201ENST00000418944 1126 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 AL138785.1-201ENST00000425821 331 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 RPL7P4-203ENST00000430239 730 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 CNOT7P2-201ENST00000441051 832 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 UBA52P7-201ENST00000486088 380 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 RPL7P51-201ENST00000490532 749 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 RPL37AP8-201ENST00000494116 276 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 AC092045.1-201ENST00000495716 1231 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 RN7SL652P-201ENST00000577769 300 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 AC069366.1-201ENST00000583159 838 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 VN1R79P-201ENST00000593540 513 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 BPIFA4P-203ENST00000603168 689 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 AL356274.1-201ENST00000617064 410 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 AC026124.2-201ENST00000621847 656 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 AC091905.4-201ENST00000623432 202 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 LINC01739-205ENST00000641890 573 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 HSPA8P1-201ENST00000425843 1833 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
AP1S3Q96PC3 AC095050.2-201ENST00000510748 1458 ntBASIC3.28□□□□□ -1.88
AP1S3Q96PC3 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 ZNF137P-201ENST00000456718 1920 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 CDY3P-201ENST00000454543 1618 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 RN7SKP95-201ENST00000362860 303 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 RNA5SP151-201ENST00000365632 117 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 SDHCP2-201ENST00000398565 501 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 RPL6P29-201ENST00000414863 865 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 HMGB3P5-201ENST00000428894 612 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 AC022022.1-201ENST00000430304 178 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 CDY14P-201ENST00000431260 1014 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 AC097523.2-201ENST00000435551 652 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 AC016831.4-201ENST00000438302 307 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 CDY12P-201ENST00000440679 1015 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 CDY13P-201ENST00000445813 1015 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 CDY23P-201ENST00000451661 1014 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 RN7SL174P-201ENST00000475578 289 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 STRADBP1-201ENST00000478954 1281 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 AC068305.1-201ENST00000497406 726 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 SCARNA22-201ENST00000503991 125 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 AC020593.1-201ENST00000507399 299 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 SCARNA21.2-201ENST00000516600 166 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 MORF4L1P3-201ENST00000525966 950 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 AC091515.1-201ENST00000548110 679 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 BNIP3P32-201ENST00000600015 554 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 Z98200.1-201ENST00000607298 470 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 AL512356.3-201ENST00000623005 461 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 U3.53-201ENST00000628922 216 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 AC053481.2-202ENST00000582394 1500 ntBASIC3.27□□□□□ -1.89
AP1S3Q96PC3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
AP1S3Q96PC3 ZNF962P-201ENST00000443465 3140 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms