Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
ERCC4Q92889 RNA5SP284-201ENST00000384547 118 ntBASIC6.04□□□□□ -1.44
ERCC4Q92889 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ERCC4Q92889 RPS27AP11-201ENST00000402798 447 ntBASIC6.04□□□□□ -1.44
ERCC4Q92889 OR6E1P-201ENST00000414424 923 ntBASIC6.04□□□□□ -1.44
ERCC4Q92889 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC6.04□□□□□ -1.44
ERCC4Q92889 AC019178.2-201ENST00000423595 505 ntBASIC6.04□□□□□ -1.44
ERCC4Q92889 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.04□□□□□ -1.44
ERCC4Q92889 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.04□□□□□ -1.44
ERCC4Q92889 AC002542.1-201ENST00000440683 193 ntBASIC6.04□□□□□ -1.44
ERCC4Q92889 NOP56P2-201ENST00000447491 769 ntBASIC6.04□□□□□ -1.44
ERCC4Q92889 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.04□□□□□ -1.44
ERCC4Q92889 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC6.04□□□□□ -1.44
ERCC4Q92889 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC6.04□□□□□ -1.44
ERCC4Q92889 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC6.04□□□□□ -1.44
ERCC4Q92889 AC092754.1-201ENST00000472975 479 ntBASIC6.04□□□□□ -1.44
ERCC4Q92889 AC007998.1-201ENST00000474156 672 ntBASIC6.04□□□□□ -1.44
ERCC4Q92889 SNORD46.2-201ENST00000516021 102 ntBASIC6.04□□□□□ -1.44
ERCC4Q92889 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.04□□□□□ -1.44
ERCC4Q92889 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.04□□□□□ -1.44
ERCC4Q92889 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ERCC4Q92889 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.04□□□□□ -1.44
ERCC4Q92889 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.04□□□□□ -1.44
ERCC4Q92889 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC6.04□□□□□ -1.44
ERCC4Q92889 AC127024.5-201ENST00000580085 462 ntBASIC6.04□□□□□ -1.44
ERCC4Q92889 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC6.04□□□□□ -1.44
ERCC4Q92889 PRPF19P1-201ENST00000584766 898 ntBASIC6.04□□□□□ -1.44
ERCC4Q92889 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ERCC4Q92889 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC6.04□□□□□ -1.44
ERCC4Q92889 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.04□□□□□ -1.44
ERCC4Q92889 VN1R74P-201ENST00000613259 503 ntBASIC6.04□□□□□ -1.44
ERCC4Q92889 ZNF733P-202ENST00000444809 1573 ntBASIC6.04□□□□□ -1.44
ERCC4Q92889 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ERCC4Q92889 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ERCC4Q92889 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ERCC4Q92889 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6.04□□□□□ -1.44
ERCC4Q92889 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ERCC4Q92889 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
ERCC4Q92889 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ERCC4Q92889 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ERCC4Q92889 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC6.03□□□□□ -1.44
ERCC4Q92889 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ERCC4Q92889 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
ERCC4Q92889 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.03□□□□□ -1.44
ERCC4Q92889 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ERCC4Q92889 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ERCC4Q92889 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ERCC4Q92889 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
ERCC4Q92889 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
ERCC4Q92889 Y_RNA.465-201ENST00000384293 102 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 MIR551A-201ENST00000385042 96 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 RPS3AP26-201ENST00000398259 784 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 RPS3AP2-201ENST00000407190 754 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 AP000357.1-201ENST00000409926 1165 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 Y_RNA.599-201ENST00000410489 109 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 AC013404.1-201ENST00000413068 249 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC6.03□□□□□ -1.44
ERCC4Q92889 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.03□□□□□ -1.44
ERCC4Q92889 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.03□□□□□ -1.44
ERCC4Q92889 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 AC004074.1-201ENST00000421810 1063 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.03□□□□□ -1.44
ERCC4Q92889 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.03□□□□□ -1.44
ERCC4Q92889 AC234781.2-201ENST00000426370 994 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC6.03□□□□□ -1.44
ERCC4Q92889 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.03□□□□□ -1.44
ERCC4Q92889 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.03□□□□□ -1.44
ERCC4Q92889 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.03□□□□□ -1.44
ERCC4Q92889 MTCO1P52-201ENST00000433928 531 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 AC098826.1-201ENST00000433943 471 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.03□□□□□ -1.44
ERCC4Q92889 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.03□□□□□ -1.44
ERCC4Q92889 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.03□□□□□ -1.44
ERCC4Q92889 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.03□□□□□ -1.44
ERCC4Q92889 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC6.03□□□□□ -1.44
ERCC4Q92889 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.03□□□□□ -1.44
ERCC4Q92889 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
ERCC4Q92889 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC6.03□□□□□ -1.44
ERCC4Q92889 AC245028.2-201ENST00000458673 253 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 AC138866.2-201ENST00000508650 584 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.03□□□□□ -1.44
ERCC4Q92889 OR5H4P-201ENST00000510851 923 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ERCC4Q92889 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC6.03□□□□□ -1.44
ERCC4Q92889 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ERCC4Q92889 YWHABP2-201ENST00000540201 713 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.03□□□□□ -1.44
ERCC4Q92889 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.03□□□□□ -1.44
ERCC4Q92889 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.03□□□□□ -1.44
ERCC4Q92889 MTCYBP13-201ENST00000578634 1093 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 MIR3614-201ENST00000581261 86 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 AC022069.1-201ENST00000582910 658 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.03□□□□□ -1.44
ERCC4Q92889 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC6.03□□□□□ -1.44
ERCC4Q92889 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.03□□□□□ -1.44
ERCC4Q92889 AC008115.3-201ENST00000614874 549 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.03□□□□□ -1.44
ERCC4Q92889 AC098679.5-201ENST00000624394 571 ntBASIC6.03□□□□□ -1.44
ERCC4Q92889 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.03□□□□□ -1.44
ERCC4Q92889 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms