Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 AP000357.1-201ENST00000409926 1165 ntBASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 AL162591.2-201ENST00000449634 317 ntBASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 RPL35AP15-201ENST00000468042 339 ntBASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 AC012158.1-204ENST00000483430 465 ntBASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 ATP1B1P1-201ENST00000509767 915 ntBASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 AC104662.1-201ENST00000604448 511 ntBASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SHROOM3Q8TF72 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 RPL21P65-201ENST00000406094 466 ntBASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 RNA5SP36-201ENST00000410197 133 ntBASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 RPL6P29-201ENST00000414863 865 ntBASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 KRR1P1-201ENST00000419430 803 ntBASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 YME1L1P1-201ENST00000429435 297 ntBASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 RPS3AP12-201ENST00000443616 753 ntBASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 RPL6P5-201ENST00000445678 828 ntBASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 AC005008.1-201ENST00000456151 612 ntBASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 RPL35P6-201ENST00000490024 372 ntBASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 AC010374.1-201ENST00000503762 1237 ntBASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 IGLV3-26-201ENST00000520756 302 ntBASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 OR5D2P-201ENST00000524390 911 ntBASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 AC027807.1-201ENST00000559921 996 ntBASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 AC091979.2-201ENST00000607514 214 ntBASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 MIR6867-201ENST00000610636 67 ntBASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 uc_338.13-201ENST00000618243 179 ntBASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 AC039056.2-201ENST00000622261 511 ntBASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.7
SHROOM3Q8TF72 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 AL929601.4-201ENST00000613011 1341 ntBASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 SPRR2C-201ENST00000290702 219 ntBASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 RNA5SP283-201ENST00000365604 119 ntBASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 HMGB3P5-201ENST00000428894 612 ntBASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 SNORA67.7-201ENST00000516664 135 ntBASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 AC011477.5-201ENST00000586571 259 ntBASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 AP005019.3-201ENST00000620418 560 ntBASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SHROOM3Q8TF72 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 SNORA62.3-201ENST00000365110 153 ntBASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 AC093578.1-201ENST00000415219 368 ntBASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 RPL23AP25-201ENST00000430973 463 ntBASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 AC011998.1-201ENST00000433403 117 ntBASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 AL353600.1-201ENST00000608148 251 ntBASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 PCA3_2.1-201ENST00000612507 409 ntBASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHROOM3Q8TF72 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms