Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 RNU2-30P-201ENST00000516209 141 ntBASIC4.79□□□□□ -1.64
CCDC112Q8NEF3 AC018442.3-201ENST00000523025 183 ntBASIC4.79□□□□□ -1.64
CCDC112Q8NEF3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC112Q8NEF3 AP006289.1-201ENST00000538089 277 ntBASIC4.79□□□□□ -1.64
CCDC112Q8NEF3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC112Q8NEF3 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC112Q8NEF3 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC112Q8NEF3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC112Q8NEF3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC112Q8NEF3 AC019193.2-201ENST00000610012 634 ntBASIC4.79□□□□□ -1.64
CCDC112Q8NEF3 AC138907.10-201ENST00000623708 983 ntBASIC4.79□□□□□ -1.64
CCDC112Q8NEF3 MIR7641-1-201ENST00000627518 61 ntBASIC4.79□□□□□ -1.64
CCDC112Q8NEF3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC112Q8NEF3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC112Q8NEF3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC112Q8NEF3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 AC093775.1-201ENST00000624154 1868 ntBASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 RNA5SP502-201ENST00000362694 119 ntBASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 OR1F12-201ENST00000402365 945 ntBASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 DNAJC19P7-201ENST00000428811 344 ntBASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 ELOCP3-201ENST00000439303 348 ntBASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 AC073264.2-201ENST00000448886 166 ntBASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 MORF4L1P4-201ENST00000450245 976 ntBASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 RPS29P33-201ENST00000456717 146 ntBASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 AC006517.1-201ENST00000480485 328 ntBASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 MTND4LP2-201ENST00000502312 285 ntBASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 AC108145.1-201ENST00000503770 153 ntBASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 MIR6780A-201ENST00000615089 68 ntBASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC112Q8NEF3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 AC021146.4-201ENST00000309229 279 ntBASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 RNU6-398P-201ENST00000384143 109 ntBASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 AC019050.1-201ENST00000418508 492 ntBASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 RPS12P10-201ENST00000427031 377 ntBASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 AC092017.2-201ENST00000427600 362 ntBASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 UBE2V1P3-201ENST00000439651 417 ntBASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 RPL23AP43-201ENST00000446445 471 ntBASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 AL513533.1-201ENST00000453728 415 ntBASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 NDUFA5P9-201ENST00000472609 340 ntBASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 AC105918.1-201ENST00000474399 838 ntBASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 RN7SKP5-201ENST00000517045 272 ntBASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 AC010547.7-201ENST00000570323 333 ntBASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 ELOCP28-201ENST00000590044 317 ntBASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC112Q8NEF3 AL929601.4-201ENST00000613011 1341 ntBASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 AL607077.1-201ENST00000401718 499 ntBASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 RPS20P14-201ENST00000412545 360 ntBASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 AC073136.2-201ENST00000417282 849 ntBASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 BX510359.2-201ENST00000417920 305 ntBASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 NPM1P39-201ENST00000449818 867 ntBASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 AL592156.1-201ENST00000508758 304 ntBASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 OR7H2P-201ENST00000513483 306 ntBASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 KCTD9P6-201ENST00000522306 950 ntBASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 AP001880.2-201ENST00000538233 448 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms